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LINC00330 (long intergenic non-protein coding RNA 330)

Identity

Alias_namesNCRNA00330
non-protein coding RNA 330
Other alias
HGNC (Hugo) LINC00330
LocusID (NCBI) 144817
Atlas_Id 65374
Location 13q14.12  [Link to chromosome band 13q14]
Location_base_pair Starts at 44799504 and ends at 44809630 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00330   42047
Cards
Entrez_Gene (NCBI)LINC00330  144817  long intergenic non-protein coding RNA 330
AliasesNCRNA00330
GeneCards (Weizmann)LINC00330
Ensembl hg19 (Hinxton)ENSG00000235097 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235097 [Gene_View]  chr13:44799504-44809630 [Contig_View]  LINC00330 [Vega]
ICGC DataPortalENSG00000235097
TCGA cBioPortalLINC00330
AceView (NCBI)LINC00330
Genatlas (Paris)LINC00330
WikiGenes144817
SOURCE (Princeton)LINC00330
Genetics Home Reference (NIH)LINC00330
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00330  -     chr13:44799504-44809630 -  13q14.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00330  -     13q14.12   [Description]    (hg19-Feb_2009)
EnsemblLINC00330 - 13q14.12 [CytoView hg19]  LINC00330 - 13q14.12 [CytoView hg38]
Mapping of homologs : NCBILINC00330 [Mapview hg19]  LINC00330 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056732
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00330
Cluster EST : UnigeneHs.585616 [ NCBI ]
CGAP (NCI)Hs.585616
Alternative Splicing GalleryENSG00000235097
Gene ExpressionLINC00330 [ NCBI-GEO ]   LINC00330 [ EBI - ARRAY_EXPRESS ]   LINC00330 [ SEEK ]   LINC00330 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00330 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)144817
GTEX Portal (Tissue expression)LINC00330
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00330
DMDM Disease mutations144817
Blocks (Seattle)LINC00330
Human Protein AtlasENSG00000235097
Protein Interaction databases
FunCoupENSG00000235097
BioGRIDLINC00330
STRING (EMBL)LINC00330
ZODIACLINC00330
Ontologies - Pathways
Huge Navigator LINC00330 [HugePedia]
snp3D : Map Gene to Disease144817
BioCentury BCIQLINC00330
ClinGenLINC00330
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD144817
Clinical trialLINC00330
Miscellaneous
canSAR (ICR)LINC00330 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00330
EVEXLINC00330
GoPubMedLINC00330
iHOPLINC00330
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:12:58 CEST 2017

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