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LINC00333 (long intergenic non-protein coding RNA 333)

Identity

Alias_namesNCRNA00333
non-protein coding RNA 333
Other alias
HGNC (Hugo) LINC00333
LocusID (NCBI) 100874128
Atlas_Id 65377
Location 13q31.1  [Link to chromosome band 13q31]
Location_base_pair Starts at 84140602 and ends at 84606768 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00333   42050
Cards
Entrez_Gene (NCBI)LINC00333  100874128  long intergenic non-protein coding RNA 333
AliasesNCRNA00333
GeneCards (Weizmann)LINC00333
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:84140602-84606768 [Contig_View]  LINC00333 [Vega]
TCGA cBioPortalLINC00333
AceView (NCBI)LINC00333
Genatlas (Paris)LINC00333
WikiGenes100874128
SOURCE (Princeton)LINC00333
Genetics Home Reference (NIH)LINC00333
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00333  -     chr13:84140602-84606768 +  13q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00333  -     13q31.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00333 - 13q31.1 [CytoView hg19]  LINC00333 - 13q31.1 [CytoView hg38]
Mapping of homologs : NCBILINC00333 [Mapview hg19]  LINC00333 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BI821261
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00333
Cluster EST : UnigeneHs.578060 [ NCBI ]
CGAP (NCI)Hs.578060
Gene ExpressionLINC00333 [ NCBI-GEO ]   LINC00333 [ EBI - ARRAY_EXPRESS ]   LINC00333 [ SEEK ]   LINC00333 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00333 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874128
GTEX Portal (Tissue expression)LINC00333
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00333
DMDM Disease mutations100874128
Blocks (Seattle)LINC00333
Protein Interaction databases
BioGRIDLINC00333
STRING (EMBL)LINC00333
ZODIACLINC00333
Ontologies - Pathways
Huge Navigator LINC00333 [HugePedia]
snp3D : Map Gene to Disease100874128
BioCentury BCIQLINC00333
ClinGenLINC00333
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874128
Clinical trialLINC00333
Miscellaneous
canSAR (ICR)LINC00333 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00333
EVEXLINC00333
GoPubMedLINC00333
iHOPLINC00333
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:28:07 CET 2017

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