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LINC00334 (long intergenic non-protein coding RNA 334)

Identity

Alias_namesC21orf89
NCRNA00334
chromosome 21 open reading frame 89
non-protein coding RNA 334
Other alias
HGNC (Hugo) LINC00334
LocusID (NCBI) 114042
Atlas_Id 65378
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 45234340 and ends at 45258730 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00334   16425
Cards
Entrez_Gene (NCBI)LINC00334  114042  long intergenic non-protein coding RNA 334
AliasesC21orf89; NCRNA00334
GeneCards (Weizmann)LINC00334
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:45234340-45258730 [Contig_View]  LINC00334 [Vega]
TCGA cBioPortalLINC00334
AceView (NCBI)LINC00334
Genatlas (Paris)LINC00334
WikiGenes114042
SOURCE (Princeton)LINC00334
Genetics Home Reference (NIH)LINC00334
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00334  -     chr21:45234340-45258730 +  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00334  -     21q22.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00334 - 21q22.3 [CytoView hg19]  LINC00334 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBILINC00334 [Mapview hg19]  LINC00334 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF426268
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00334
Cluster EST : UnigeneHs.375832 [ NCBI ]
CGAP (NCI)Hs.375832
Gene ExpressionLINC00334 [ NCBI-GEO ]   LINC00334 [ EBI - ARRAY_EXPRESS ]   LINC00334 [ SEEK ]   LINC00334 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00334 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)114042
GTEX Portal (Tissue expression)LINC00334
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00334
DMDM Disease mutations114042
Blocks (Seattle)LINC00334
IPIIPI00168277   
Protein Interaction databases
BioGRIDLINC00334
STRING (EMBL)LINC00334
ZODIACLINC00334
Ontologies - Pathways
Huge Navigator LINC00334 [HugePedia]
snp3D : Map Gene to Disease114042
BioCentury BCIQLINC00334
ClinGenLINC00334
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD114042
Chemical/Pharm GKB GenePA25876
Clinical trialLINC00334
Miscellaneous
canSAR (ICR)LINC00334 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00334
EVEXLINC00334
GoPubMedLINC00334
iHOPLINC00334
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:19:56 CEST 2017

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