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LINC00343 (long intergenic non-protein coding RNA 343)

Identity

Alias_namesNCRNA00343
LINC00344
NCRNA00344
non-protein coding RNA 343
long intergenic non-protein coding RNA 344
non-protein coding RNA 344
Other alias
HGNC (Hugo) LINC00343
LocusID (NCBI) 144920
Atlas_Id 65383
Location 13q33.2  [Link to chromosome band 13q33]
Location_base_pair Starts at 106359179 and ends at 106414145 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00343   42500
Cards
Entrez_Gene (NCBI)LINC00343  144920  long intergenic non-protein coding RNA 343
AliasesLINC00344; NCRNA00343; NCRNA00344
GeneCards (Weizmann)LINC00343
Ensembl hg19 (Hinxton) [Gene_View]  chr13:106359179-106414145 [Contig_View]  LINC00343 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:106359179-106414145 [Contig_View]  LINC00343 [Vega]
TCGA cBioPortalLINC00343
AceView (NCBI)LINC00343
Genatlas (Paris)LINC00343
WikiGenes144920
SOURCE (Princeton)LINC00343
Genetics Home Reference (NIH)LINC00343
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00343  -     chr13:106359179-106414145 +  13q33.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00343  -     13q33.2   [Description]    (hg38-Dec_2013)
EnsemblLINC00343 - 13q33.2 [CytoView hg19]  LINC00343 - 13q33.2 [CytoView hg38]
Mapping of homologs : NCBILINC00343 [Mapview hg19]  LINC00343 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI026672 AI674044 AK058053 BC126908 BC127249
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000013 NC_018924 NT_009952 NW_004929389
Consensus coding sequences : CCDS (NCBI)LINC00343
Cluster EST : UnigeneHs.567700 [ NCBI ]
CGAP (NCI)Hs.567700
Gene ExpressionLINC00343 [ NCBI-GEO ]   LINC00343 [ EBI - ARRAY_EXPRESS ]   LINC00343 [ SEEK ]   LINC00343 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00343 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)144920
GTEX Portal (Tissue expression)LINC00343
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00343
DMDM Disease mutations144920
Blocks (Seattle)LINC00343
Protein Interaction databases
BioGRIDLINC00343
STRING (EMBL)LINC00343
ZODIACLINC00343
Ontologies - Pathways
Huge Navigator LINC00343 [HugePedia]
snp3D : Map Gene to Disease144920
BioCentury BCIQLINC00343
ClinGenLINC00343
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD144920
Clinical trialLINC00343
Miscellaneous
canSAR (ICR)LINC00343 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00343
EVEXLINC00343
GoPubMedLINC00343
iHOPLINC00343
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:11:29 CET 2017

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