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LINC00347 (long intergenic non-protein coding RNA 347)

Identity

Other alias-
HGNC (Hugo) LINC00347
LocusID (NCBI) 338864
Atlas_Id 65385
Location 13q22.1  [Link to chromosome band 13q22]
Location_base_pair Starts at 74552843 and ends at 74557120 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00347   27890
Cards
Entrez_Gene (NCBI)LINC00347  338864  long intergenic non-protein coding RNA 347
Aliases
GeneCards (Weizmann)LINC00347
Ensembl hg19 (Hinxton)ENSG00000236678 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236678 [Gene_View]  chr13:74552843-74557120 [Contig_View]  LINC00347 [Vega]
ICGC DataPortalENSG00000236678
TCGA cBioPortalLINC00347
AceView (NCBI)LINC00347
Genatlas (Paris)LINC00347
WikiGenes338864
SOURCE (Princeton)LINC00347
Genetics Home Reference (NIH)LINC00347
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00347  -     chr13:74552843-74557120 +  13q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00347  -     13q22.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00347 - 13q22.1 [CytoView hg19]  LINC00347 - 13q22.1 [CytoView hg38]
Mapping of homologs : NCBILINC00347 [Mapview hg19]  LINC00347 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043259
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00347
Cluster EST : UnigeneHs.97408 [ NCBI ]
CGAP (NCI)Hs.97408
Alternative Splicing GalleryENSG00000236678
Gene ExpressionLINC00347 [ NCBI-GEO ]   LINC00347 [ EBI - ARRAY_EXPRESS ]   LINC00347 [ SEEK ]   LINC00347 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00347 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)338864
GTEX Portal (Tissue expression)LINC00347
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00347
DMDM Disease mutations338864
Blocks (Seattle)LINC00347
Human Protein AtlasENSG00000236678
Protein Interaction databases
FunCoupENSG00000236678
BioGRIDLINC00347
STRING (EMBL)LINC00347
ZODIACLINC00347
Ontologies - Pathways
Huge Navigator LINC00347 [HugePedia]
snp3D : Map Gene to Disease338864
BioCentury BCIQLINC00347
ClinGenLINC00347
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338864
Clinical trialLINC00347
Miscellaneous
canSAR (ICR)LINC00347 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00347
EVEXLINC00347
GoPubMedLINC00347
iHOPLINC00347
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:00 CEST 2017

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