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LINC00348 (long intergenic non-protein coding RNA 348)

Identity

Other alias-
HGNC (Hugo) LINC00348
LocusID (NCBI) 100885781
Atlas_Id 65386
Location 13q21.33  [Link to chromosome band 13q21]
Location_base_pair Starts at 71015141 and ends at 71168417 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00348   42658
Cards
Entrez_Gene (NCBI)LINC00348  100885781  long intergenic non-protein coding RNA 348
Aliases
GeneCards (Weizmann)LINC00348
Ensembl hg19 (Hinxton)ENSG00000226846 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226846 [Gene_View]  chr13:71015141-71168417 [Contig_View]  LINC00348 [Vega]
ICGC DataPortalENSG00000226846
TCGA cBioPortalLINC00348
AceView (NCBI)LINC00348
Genatlas (Paris)LINC00348
WikiGenes100885781
SOURCE (Princeton)LINC00348
Genetics Home Reference (NIH)LINC00348
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00348  -     chr13:71015141-71168417 +  13q21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00348  -     13q21.33   [Description]    (hg19-Feb_2009)
EnsemblLINC00348 - 13q21.33 [CytoView hg19]  LINC00348 - 13q21.33 [CytoView hg38]
Mapping of homologs : NCBILINC00348 [Mapview hg19]  LINC00348 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA431807 AI480312
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00348
Cluster EST : UnigeneHs.372660 [ NCBI ]
CGAP (NCI)Hs.372660
Alternative Splicing GalleryENSG00000226846
Gene ExpressionLINC00348 [ NCBI-GEO ]   LINC00348 [ EBI - ARRAY_EXPRESS ]   LINC00348 [ SEEK ]   LINC00348 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00348 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100885781
GTEX Portal (Tissue expression)LINC00348
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00348
DMDM Disease mutations100885781
Blocks (Seattle)LINC00348
Human Protein AtlasENSG00000226846
Protein Interaction databases
FunCoupENSG00000226846
BioGRIDLINC00348
STRING (EMBL)LINC00348
ZODIACLINC00348
Ontologies - Pathways
Huge Navigator LINC00348 [HugePedia]
snp3D : Map Gene to Disease100885781
BioCentury BCIQLINC00348
ClinGenLINC00348
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100885781
Clinical trialLINC00348
Miscellaneous
canSAR (ICR)LINC00348 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00348
EVEXLINC00348
GoPubMedLINC00348
iHOPLINC00348
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:13:00 CEST 2017

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