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LINC00353 (long intergenic non-protein coding RNA 353)

Identity

Other alias-
HGNC (Hugo) LINC00353
LocusID (NCBI) 100874139
Atlas_Id 65388
Location 13q31.3  [Link to chromosome band 13q31]
Location_base_pair Starts at 89548794 and ends at 89564413 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00353   42671
Cards
Entrez_Gene (NCBI)LINC00353  100874139  long intergenic non-protein coding RNA 353
Aliases
GeneCards (Weizmann)LINC00353
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:89548794-89564413 [Contig_View]  LINC00353 [Vega]
TCGA cBioPortalLINC00353
AceView (NCBI)LINC00353
Genatlas (Paris)LINC00353
WikiGenes100874139
SOURCE (Princeton)LINC00353
Genetics Home Reference (NIH)LINC00353
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00353  -     chr13:89548794-89564413 -  13q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00353  -     13q31.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00353 - 13q31.3 [CytoView hg19]  LINC00353 - 13q31.3 [CytoView hg38]
Mapping of homologs : NCBILINC00353 [Mapview hg19]  LINC00353 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG193334
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00353
Cluster EST : UnigeneHs.742173 [ NCBI ]
CGAP (NCI)Hs.742173
Gene ExpressionLINC00353 [ NCBI-GEO ]   LINC00353 [ EBI - ARRAY_EXPRESS ]   LINC00353 [ SEEK ]   LINC00353 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00353 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874139
GTEX Portal (Tissue expression)LINC00353
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00353
DMDM Disease mutations100874139
Blocks (Seattle)LINC00353
Protein Interaction databases
BioGRIDLINC00353
STRING (EMBL)LINC00353
ZODIACLINC00353
Ontologies - Pathways
Huge Navigator LINC00353 [HugePedia]
snp3D : Map Gene to Disease100874139
BioCentury BCIQLINC00353
ClinGenLINC00353
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874139
Clinical trialLINC00353
Miscellaneous
canSAR (ICR)LINC00353 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00353
EVEXLINC00353
GoPubMedLINC00353
iHOPLINC00353
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:00 CEST 2017

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