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LINC00354 (long intergenic non-protein coding RNA 354)

Identity

Other alias-
HGNC (Hugo) LINC00354
LocusID (NCBI) 101928616
Atlas_Id 65389
Location 13q34  [Link to chromosome band 13q34]
Location_base_pair Starts at 112547692 and ends at 112555490 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00354   42672
Cards
Entrez_Gene (NCBI)LINC00354  101928616  long intergenic non-protein coding RNA 354
Aliases
GeneCards (Weizmann)LINC00354
Ensembl hg19 (Hinxton) [Gene_View]  chr13:112547692-112555490 [Contig_View]  LINC00354 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:112547692-112555490 [Contig_View]  LINC00354 [Vega]
TCGA cBioPortalLINC00354
AceView (NCBI)LINC00354
Genatlas (Paris)LINC00354
WikiGenes101928616
SOURCE (Princeton)LINC00354
Genetics Home Reference (NIH)LINC00354
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00354  -     chr13:112547692-112555490 +  13q34   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00354  -     13q34   [Description]    (hg38-Dec_2013)
EnsemblLINC00354 - 13q34 [CytoView hg19]  LINC00354 - 13q34 [CytoView hg38]
Mapping of homologs : NCBILINC00354 [Mapview hg19]  LINC00354 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC032817 BQ186748 BX117816 DB457517 HG505890
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000013 NC_018924 NT_027140 NW_004929390
Consensus coding sequences : CCDS (NCBI)LINC00354
Cluster EST : UnigeneHs.528450 [ NCBI ]
CGAP (NCI)Hs.528450
Gene ExpressionLINC00354 [ NCBI-GEO ]   LINC00354 [ EBI - ARRAY_EXPRESS ]   LINC00354 [ SEEK ]   LINC00354 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00354 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928616
GTEX Portal (Tissue expression)LINC00354
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00354
DMDM Disease mutations101928616
Blocks (Seattle)LINC00354
Protein Interaction databases
BioGRIDLINC00354
STRING (EMBL)LINC00354
ZODIACLINC00354
Ontologies - Pathways
Huge Navigator LINC00354 [HugePedia]
snp3D : Map Gene to Disease101928616
BioCentury BCIQLINC00354
ClinGenLINC00354
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928616
Clinical trialLINC00354
Miscellaneous
canSAR (ICR)LINC00354 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00354
EVEXLINC00354
GoPubMedLINC00354
iHOPLINC00354
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:11:30 CET 2017

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