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LINC00379 (long intergenic non-protein coding RNA 379)

Identity

Other alias-
HGNC (Hugo) LINC00379
LocusID (NCBI) 100874150
Atlas_Id 65399
Location 13q31.3  [Link to chromosome band 13q31]
Location_base_pair Starts at 91779867 and ends at 91863952 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00379   42705
Cards
Entrez_Gene (NCBI)LINC00379  100874150  long intergenic non-protein coding RNA 379
Aliases
GeneCards (Weizmann)LINC00379
Ensembl hg19 (Hinxton) [Gene_View]  chr13:91779867-91863952 [Contig_View]  LINC00379 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:91779867-91863952 [Contig_View]  LINC00379 [Vega]
TCGA cBioPortalLINC00379
AceView (NCBI)LINC00379
Genatlas (Paris)LINC00379
WikiGenes100874150
SOURCE (Princeton)LINC00379
Genetics Home Reference (NIH)LINC00379
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00379  -     chr13:91779867-91863952 -  13q31.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00379  -     13q31.3   [Description]    (hg38-Dec_2013)
EnsemblLINC00379 - 13q31.3 [CytoView hg19]  LINC00379 - 13q31.3 [CytoView hg38]
Mapping of homologs : NCBILINC00379 [Mapview hg19]  LINC00379 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI863608 CD387405 HG505813 HG505814
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000013 NC_018924 NT_009952 NW_004929389
Consensus coding sequences : CCDS (NCBI)LINC00379
Cluster EST : UnigeneHs.711947 [ NCBI ]
CGAP (NCI)Hs.711947
Gene ExpressionLINC00379 [ NCBI-GEO ]   LINC00379 [ EBI - ARRAY_EXPRESS ]   LINC00379 [ SEEK ]   LINC00379 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00379 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874150
GTEX Portal (Tissue expression)LINC00379
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00379
DMDM Disease mutations100874150
Blocks (Seattle)LINC00379
Protein Interaction databases
BioGRIDLINC00379
STRING (EMBL)LINC00379
ZODIACLINC00379
Ontologies - Pathways
Huge Navigator LINC00379 [HugePedia]
snp3D : Map Gene to Disease100874150
BioCentury BCIQLINC00379
ClinGenLINC00379
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874150
Clinical trialLINC00379
Miscellaneous
canSAR (ICR)LINC00379 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00379
EVEXLINC00379
GoPubMedLINC00379
iHOPLINC00379
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:11:34 CET 2017

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