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LINC00380 (long intergenic non-protein coding RNA 380)

Identity

Alias_symbol (synonym)TCONS_00021685
Other alias-
HGNC (Hugo) LINC00380
LocusID (NCBI) 101930747
Atlas_Id 65400
Location 13q31.3  [Link to chromosome band 13q31]
Location_base_pair Starts at 91087255 and ends at 91089617 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00380   42706
Cards
Entrez_Gene (NCBI)LINC00380  101930747  long intergenic non-protein coding RNA 380
Aliases
GeneCards (Weizmann)LINC00380
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:91087255-91089617 [Contig_View]  LINC00380 [Vega]
TCGA cBioPortalLINC00380
AceView (NCBI)LINC00380
Genatlas (Paris)LINC00380
WikiGenes101930747
SOURCE (Princeton)LINC00380
Genetics Home Reference (NIH)LINC00380
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00380  -     chr13:91087255-91089617 -  13q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00380  -     13q31.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00380 - 13q31.3 [CytoView hg19]  LINC00380 - 13q31.3 [CytoView hg38]
Mapping of homologs : NCBILINC00380 [Mapview hg19]  LINC00380 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA609658 BX097335
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00380
Cluster EST : UnigeneHs.112745 [ NCBI ]
CGAP (NCI)Hs.112745
Gene ExpressionLINC00380 [ NCBI-GEO ]   LINC00380 [ EBI - ARRAY_EXPRESS ]   LINC00380 [ SEEK ]   LINC00380 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00380 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101930747
GTEX Portal (Tissue expression)LINC00380
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00380
DMDM Disease mutations101930747
Blocks (Seattle)LINC00380
Protein Interaction databases
BioGRIDLINC00380
STRING (EMBL)LINC00380
ZODIACLINC00380
Ontologies - Pathways
Huge Navigator LINC00380 [HugePedia]
snp3D : Map Gene to Disease101930747
BioCentury BCIQLINC00380
ClinGenLINC00380
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101930747
Clinical trialLINC00380
Miscellaneous
canSAR (ICR)LINC00380 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00380
EVEXLINC00380
GoPubMedLINC00380
iHOPLINC00380
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:03 CEST 2017

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