Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC00382 (long intergenic non-protein coding RNA 382)


Alias (NCBI)TCONS_00021500
HGNC (Hugo) LINC00382
HGNC Alias symbTCONS_00021500
LocusID (NCBI) 101927195
Atlas_Id 65402
Location 13q31.1  [Link to chromosome band 13q31]
Location_base_pair Starts at 79872586 and ends at 79918036 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC00382   42709
Entrez_Gene (NCBI)LINC00382    long intergenic non-protein coding RNA 382
GeneCards (Weizmann)LINC00382
Ensembl hg19 (Hinxton)ENSG00000229175 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229175 [Gene_View]  ENSG00000229175 [Sequence]  chr13:79872586-79918036 [Contig_View]  LINC00382 [Vega]
ICGC DataPortalENSG00000229175
TCGA cBioPortalLINC00382
AceView (NCBI)LINC00382
Genatlas (Paris)LINC00382
SOURCE (Princeton)LINC00382
Genetics Home Reference (NIH)LINC00382
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00382  -     chr13:79872586-79918036 +  13q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00382  -     13q31.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC00382 - 13q31.1 [CytoView hg19]  LINC00382 - 13q31.1 [CytoView hg38]
Genome Data Viewer NCBILINC00382 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC036310 BG717866
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00382
Gene ExpressionLINC00382 [ NCBI-GEO ]   LINC00382 [ EBI - ARRAY_EXPRESS ]   LINC00382 [ SEEK ]   LINC00382 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00382 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00382 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101927195
GTEX Portal (Tissue expression)LINC00382
Human Protein AtlasENSG00000229175-LINC00382 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00382
Human Protein Atlas [tissue]ENSG00000229175-LINC00382 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:56:01 CEST 2021

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