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LINC00382 (long intergenic non-protein coding RNA 382)

Identity

Alias (NCBI)TCONS_00021500
HGNC (Hugo) LINC00382
HGNC Alias symbTCONS_00021500
LocusID (NCBI) 101927195
Atlas_Id 65402
Location 13q31.1  [Link to chromosome band 13q31]
Location_base_pair Starts at 79872586 and ends at 79918036 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC00382   42709
Cards
Entrez_Gene (NCBI)LINC00382    long intergenic non-protein coding RNA 382
AliasesTCONS_00021500
GeneCards (Weizmann)LINC00382
Ensembl hg19 (Hinxton)ENSG00000229175 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229175 [Gene_View]  ENSG00000229175 [Sequence]  chr13:79872586-79918036 [Contig_View]  LINC00382 [Vega]
ICGC DataPortalENSG00000229175
TCGA cBioPortalLINC00382
AceView (NCBI)LINC00382
Genatlas (Paris)LINC00382
SOURCE (Princeton)LINC00382
Genetics Home Reference (NIH)LINC00382
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00382  -     chr13:79872586-79918036 +  13q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00382  -     13q31.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC00382 - 13q31.1 [CytoView hg19]  LINC00382 - 13q31.1 [CytoView hg38]
ImmunoBaseENSG00000229175
Genome Data Viewer NCBILINC00382 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC036310 BG717866
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00382
Gene ExpressionLINC00382 [ NCBI-GEO ]   LINC00382 [ EBI - ARRAY_EXPRESS ]   LINC00382 [ SEEK ]   LINC00382 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00382 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00382 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101927195
GTEX Portal (Tissue expression)LINC00382
Human Protein AtlasENSG00000229175-LINC00382 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00382
Human Protein Atlas [tissue]ENSG00000229175-LINC00382 [tissue]
Protein Interaction databases
BioGRIDLINC00382
STRING (EMBL)LINC00382
ZODIACLINC00382
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLINC00382
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:56:01 CEST 2021

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