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LINC00382 (long intergenic non-protein coding RNA 382)

Identity

Alias_symbol (synonym)TCONS_00021500
Other alias
HGNC (Hugo) LINC00382
LocusID (NCBI) 101927195
Atlas_Id 65402
Location 13q31.1  [Link to chromosome band 13q31]
Location_base_pair Starts at 79872586 and ends at 79918036 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00382   42709
Cards
Entrez_Gene (NCBI)LINC00382  101927195  long intergenic non-protein coding RNA 382
AliasesTCONS_00021500
GeneCards (Weizmann)LINC00382
Ensembl hg19 (Hinxton)ENSG00000229175 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229175 [Gene_View]  chr13:79872586-79918036 [Contig_View]  LINC00382 [Vega]
ICGC DataPortalENSG00000229175
TCGA cBioPortalLINC00382
AceView (NCBI)LINC00382
Genatlas (Paris)LINC00382
WikiGenes101927195
SOURCE (Princeton)LINC00382
Genetics Home Reference (NIH)LINC00382
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00382  -     chr13:79872586-79918036 +  13q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00382  -     13q31.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00382 - 13q31.1 [CytoView hg19]  LINC00382 - 13q31.1 [CytoView hg38]
Mapping of homologs : NCBILINC00382 [Mapview hg19]  LINC00382 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC036310 BG717866
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00382
Cluster EST : UnigeneHs.342412 [ NCBI ]
CGAP (NCI)Hs.342412
Alternative Splicing GalleryENSG00000229175
Gene ExpressionLINC00382 [ NCBI-GEO ]   LINC00382 [ EBI - ARRAY_EXPRESS ]   LINC00382 [ SEEK ]   LINC00382 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00382 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927195
GTEX Portal (Tissue expression)LINC00382
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00382
DMDM Disease mutations101927195
Blocks (Seattle)LINC00382
Human Protein AtlasENSG00000229175
Protein Interaction databases
FunCoupENSG00000229175
BioGRIDLINC00382
STRING (EMBL)LINC00382
ZODIACLINC00382
Ontologies - Pathways
Huge Navigator LINC00382 [HugePedia]
snp3D : Map Gene to Disease101927195
BioCentury BCIQLINC00382
ClinGenLINC00382
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927195
Clinical trialLINC00382
Miscellaneous
canSAR (ICR)LINC00382 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00382
EVEXLINC00382
GoPubMedLINC00382
iHOPLINC00382
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:03 CEST 2017

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