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LINC00384 (long intergenic non-protein coding RNA 384)

Identity

Other alias-
HGNC (Hugo) LINC00384
LocusID (NCBI) 102157400
Atlas_Id 65404
Location 13q12.3  [Link to chromosome band 13q12]
Location_base_pair Starts at 30151886 and ends at 30153074 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00384   42711
Cards
Entrez_Gene (NCBI)LINC00384  102157400  long intergenic non-protein coding RNA 384
Aliases
GeneCards (Weizmann)LINC00384
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:30151886-30153074 [Contig_View]  LINC00384 [Vega]
TCGA cBioPortalLINC00384
AceView (NCBI)LINC00384
Genatlas (Paris)LINC00384
WikiGenes102157400
SOURCE (Princeton)LINC00384
Genetics Home Reference (NIH)LINC00384
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00384  -     chr13:30151886-30153074 -  13q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00384  -     13q12.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00384 - 13q12.3 [CytoView hg19]  LINC00384 - 13q12.3 [CytoView hg38]
Mapping of homologs : NCBILINC00384 [Mapview hg19]  LINC00384 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW516367 BX648491
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00384
Cluster EST : UnigeneHs.639879 [ NCBI ]
CGAP (NCI)Hs.639879
Gene ExpressionLINC00384 [ NCBI-GEO ]   LINC00384 [ EBI - ARRAY_EXPRESS ]   LINC00384 [ SEEK ]   LINC00384 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00384 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102157400
GTEX Portal (Tissue expression)LINC00384
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00384
DMDM Disease mutations102157400
Blocks (Seattle)LINC00384
Protein Interaction databases
BioGRIDLINC00384
STRING (EMBL)LINC00384
ZODIACLINC00384
Ontologies - Pathways
Huge Navigator LINC00384 [HugePedia]
snp3D : Map Gene to Disease102157400
BioCentury BCIQLINC00384
ClinGenLINC00384
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102157400
Clinical trialLINC00384
Miscellaneous
canSAR (ICR)LINC00384 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00384
EVEXLINC00384
GoPubMedLINC00384
iHOPLINC00384
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:28:12 CET 2017

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