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LINC00390 (long intergenic non-protein coding RNA 390)

Identity

Alias_symbol (synonym)TCONS_00021641
Other alias-
HGNC (Hugo) LINC00390
LocusID (NCBI) 105370183
Atlas_Id 77731
Location 13q14.11  [Link to chromosome band 13q14]
Location_base_pair Starts at 44106091 and ends at 44147735 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00390   42718
Cards
Entrez_Gene (NCBI)LINC00390  105370183  long intergenic non-protein coding RNA 390
Aliases
GeneCards (Weizmann)LINC00390
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:44106091-44147735 [Contig_View]  LINC00390 [Vega]
TCGA cBioPortalLINC00390
AceView (NCBI)LINC00390
Genatlas (Paris)LINC00390
WikiGenes105370183
SOURCE (Princeton)LINC00390
Genetics Home Reference (NIH)LINC00390
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00390  -     chr13:44106091-44147735 -  13q14.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00390  -     13q14.11   [Description]    (hg19-Feb_2009)
EnsemblLINC00390 - 13q14.11 [CytoView hg19]  LINC00390 - 13q14.11 [CytoView hg38]
Mapping of homologs : NCBILINC00390 [Mapview hg19]  LINC00390 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ707003 AW779259 DA187376
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00390
Cluster EST : UnigeneHs.652552 [ NCBI ]
CGAP (NCI)Hs.652552
Gene ExpressionLINC00390 [ NCBI-GEO ]   LINC00390 [ EBI - ARRAY_EXPRESS ]   LINC00390 [ SEEK ]   LINC00390 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00390 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105370183
GTEX Portal (Tissue expression)LINC00390
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00390
DMDM Disease mutations105370183
Blocks (Seattle)LINC00390
Protein Interaction databases
BioGRIDLINC00390
STRING (EMBL)LINC00390
ZODIACLINC00390
Ontologies - Pathways
Huge Navigator LINC00390 [HugePedia]
snp3D : Map Gene to Disease105370183
BioCentury BCIQLINC00390
ClinGenLINC00390
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105370183
Clinical trialLINC00390
Miscellaneous
canSAR (ICR)LINC00390 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00390
EVEXLINC00390
GoPubMedLINC00390
iHOPLINC00390
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:56:27 CEST 2017

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