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LINC00400 (long intergenic non-protein coding RNA 400)

Identity

Other alias-
HGNC (Hugo) LINC00400
LocusID (NCBI) 100874159
Atlas_Id 65409
Location 13q14.11  [Link to chromosome band 13q14]
Location_base_pair Starts at 43687301 and ends at 43733602 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00400   42729
Cards
Entrez_Gene (NCBI)LINC00400  100874159  long intergenic non-protein coding RNA 400
Aliases
GeneCards (Weizmann)LINC00400
Ensembl hg19 (Hinxton) [Gene_View]  chr13:43687301-43733602 [Contig_View]  LINC00400 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:43687301-43733602 [Contig_View]  LINC00400 [Vega]
TCGA cBioPortalLINC00400
AceView (NCBI)LINC00400
Genatlas (Paris)LINC00400
WikiGenes100874159
SOURCE (Princeton)LINC00400
Genetics Home Reference (NIH)LINC00400
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00400  -     chr13:43687301-43733602 +  13q14.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00400  -     13q14.11   [Description]    (hg38-Dec_2013)
EnsemblLINC00400 - 13q14.11 [CytoView hg19]  LINC00400 - 13q14.11 [CytoView hg38]
Mapping of homologs : NCBILINC00400 [Mapview hg19]  LINC00400 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AV711458 HG505563
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000013 NC_018924 NT_024524 NW_004929388
Consensus coding sequences : CCDS (NCBI)LINC00400
Cluster EST : UnigeneHs.633241 [ NCBI ]
CGAP (NCI)Hs.633241
Gene ExpressionLINC00400 [ NCBI-GEO ]   LINC00400 [ EBI - ARRAY_EXPRESS ]   LINC00400 [ SEEK ]   LINC00400 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00400 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874159
GTEX Portal (Tissue expression)LINC00400
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00400
DMDM Disease mutations100874159
Blocks (Seattle)LINC00400
Protein Interaction databases
BioGRIDLINC00400
STRING (EMBL)LINC00400
ZODIACLINC00400
Ontologies - Pathways
Huge Navigator LINC00400 [HugePedia]
snp3D : Map Gene to Disease100874159
BioCentury BCIQLINC00400
ClinGenLINC00400
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874159
Clinical trialLINC00400
Miscellaneous
canSAR (ICR)LINC00400 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00400
EVEXLINC00400
GoPubMedLINC00400
iHOPLINC00400
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:11:37 CET 2017

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