Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC00402 (long intergenic non-protein coding RNA 402)


Alias (NCBI)-
HGNC (Hugo) LINC00402
LocusID (NCBI) 100507612
Atlas_Id 78797
Location 13q22.1  [Link to chromosome band 13q22]
Location_base_pair Starts at 74231444 and ends at 74259976 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC00402   42732
Entrez_Gene (NCBI)LINC00402    long intergenic non-protein coding RNA 402
GeneCards (Weizmann)LINC00402
Ensembl hg19 (Hinxton)ENSG00000235532 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235532 [Gene_View]  ENSG00000235532 [Sequence]  chr13:74231444-74259976 [Contig_View]  LINC00402 [Vega]
ICGC DataPortalENSG00000235532
TCGA cBioPortalLINC00402
AceView (NCBI)LINC00402
Genatlas (Paris)LINC00402
SOURCE (Princeton)LINC00402
Genetics Home Reference (NIH)LINC00402
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00402  -     chr13:74231444-74259976 +  13q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00402  -     13q22.1   [Description]    (hg19-Feb_2009)
GoldenPathLINC00402 - 13q22.1 [CytoView hg19]  LINC00402 - 13q22.1 [CytoView hg38]
Genome Data Viewer NCBILINC00402 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK056689 DA938088
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00402
Gene ExpressionLINC00402 [ NCBI-GEO ]   LINC00402 [ EBI - ARRAY_EXPRESS ]   LINC00402 [ SEEK ]   LINC00402 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00402 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00402 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100507612
GTEX Portal (Tissue expression)LINC00402
Human Protein AtlasENSG00000235532-LINC00402 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00402
Human Protein Atlas [tissue]ENSG00000235532-LINC00402 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:56:03 CEST 2021

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