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LINC00402 (long intergenic non-protein coding RNA 402)

Identity

Other alias-
HGNC (Hugo) LINC00402
LocusID (NCBI) 100507612
Atlas_Id 78797
Location 13q22.1  [Link to chromosome band 13q22]
Location_base_pair Starts at 74231444 and ends at 74259976 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00402   42732
Cards
Entrez_Gene (NCBI)LINC00402  100507612  long intergenic non-protein coding RNA 402
Aliases
GeneCards (Weizmann)LINC00402
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:74231444-74259976 [Contig_View]  LINC00402 [Vega]
TCGA cBioPortalLINC00402
AceView (NCBI)LINC00402
Genatlas (Paris)LINC00402
WikiGenes100507612
SOURCE (Princeton)LINC00402
Genetics Home Reference (NIH)LINC00402
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00402  -     chr13:74231444-74259976 +  13q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00402  -     13q22.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00402 - 13q22.1 [CytoView hg19]  LINC00402 - 13q22.1 [CytoView hg38]
Mapping of homologs : NCBILINC00402 [Mapview hg19]  LINC00402 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056689 DA938088
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00402
Cluster EST : UnigeneHs.447508 [ NCBI ]
CGAP (NCI)Hs.447508
Gene ExpressionLINC00402 [ NCBI-GEO ]   LINC00402 [ EBI - ARRAY_EXPRESS ]   LINC00402 [ SEEK ]   LINC00402 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00402 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507612
GTEX Portal (Tissue expression)LINC00402
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00402
DMDM Disease mutations100507612
Blocks (Seattle)LINC00402
Protein Interaction databases
BioGRIDLINC00402
STRING (EMBL)LINC00402
ZODIACLINC00402
Ontologies - Pathways
Huge Navigator LINC00402 [HugePedia]
snp3D : Map Gene to Disease100507612
BioCentury BCIQLINC00402
ClinGenLINC00402
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507612
Clinical trialLINC00402
Miscellaneous
canSAR (ICR)LINC00402 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00402
EVEXLINC00402
GoPubMedLINC00402
iHOPLINC00402
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:28:14 CET 2017

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