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LINC00408 (long intergenic non-protein coding RNA 408)

Identity

Other alias-
HGNC (Hugo) LINC00408
LocusID (NCBI) 100652856
Atlas_Id 65411
Location 13q11  [Link to chromosome band 13q11]
Location_base_pair Starts at 19479579 and ends at 19500881 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00408   42740
Cards
Entrez_Gene (NCBI)LINC00408  100652856  long intergenic non-protein coding RNA 408
Aliases
GeneCards (Weizmann)LINC00408
Ensembl hg19 (Hinxton) [Gene_View]  chr13:19479579-19500881 [Contig_View]  LINC00408 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:19479579-19500881 [Contig_View]  LINC00408 [Vega]
TCGA cBioPortalLINC00408
AceView (NCBI)LINC00408
Genatlas (Paris)LINC00408
WikiGenes100652856
SOURCE (Princeton)LINC00408
Genetics Home Reference (NIH)LINC00408
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00408  -     chr13:19479579-19500881 +  13q11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00408  -     13q11   [Description]    (hg38-Dec_2013)
EnsemblLINC00408 - 13q11 [CytoView hg19]  LINC00408 - 13q11 [CytoView hg38]
Mapping of homologs : NCBILINC00408 [Mapview hg19]  LINC00408 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC035261 HG505432
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000013 NC_018924 NT_024524 NW_004929388
Consensus coding sequences : CCDS (NCBI)LINC00408
Cluster EST : UnigeneHs.549878 [ NCBI ]
CGAP (NCI)Hs.549878
Gene ExpressionLINC00408 [ NCBI-GEO ]   LINC00408 [ EBI - ARRAY_EXPRESS ]   LINC00408 [ SEEK ]   LINC00408 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00408 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100652856
GTEX Portal (Tissue expression)LINC00408
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00408
DMDM Disease mutations100652856
Blocks (Seattle)LINC00408
Protein Interaction databases
BioGRIDLINC00408
STRING (EMBL)LINC00408
ZODIACLINC00408
Ontologies - Pathways
Huge Navigator LINC00408 [HugePedia]
snp3D : Map Gene to Disease100652856
BioCentury BCIQLINC00408
ClinGenLINC00408
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100652856
Clinical trialLINC00408
Miscellaneous
canSAR (ICR)LINC00408 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00408
EVEXLINC00408
GoPubMedLINC00408
iHOPLINC00408
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:11:37 CET 2017

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