Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC00421 (long intergenic non-protein coding RNA 421)

Identity

Other alias-
HGNC (Hugo) LINC00421
LocusID (NCBI) 100287114
Atlas_Id 65416
Location 13q12.11  [Link to chromosome band 13q12]
Location_base_pair Starts at 19345049 and ends at 19346749 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00421   42755
Cards
Entrez_Gene (NCBI)LINC00421  100287114  long intergenic non-protein coding RNA 421
Aliases
GeneCards (Weizmann)LINC00421
Ensembl hg19 (Hinxton)ENSG00000236834 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236834 [Gene_View]  chr13:19345049-19346749 [Contig_View]  LINC00421 [Vega]
ICGC DataPortalENSG00000236834
TCGA cBioPortalLINC00421
AceView (NCBI)LINC00421
Genatlas (Paris)LINC00421
WikiGenes100287114
SOURCE (Princeton)LINC00421
Genetics Home Reference (NIH)LINC00421
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00421  -     chr13:19345049-19346749 +  13q12.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00421  -     13q12.11   [Description]    (hg19-Feb_2009)
EnsemblLINC00421 - 13q12.11 [CytoView hg19]  LINC00421 - 13q12.11 [CytoView hg38]
Mapping of homologs : NCBILINC00421 [Mapview hg19]  LINC00421 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC022083
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00421
Cluster EST : UnigeneHs.375063 [ NCBI ]
CGAP (NCI)Hs.375063
Alternative Splicing GalleryENSG00000236834
Gene ExpressionLINC00421 [ NCBI-GEO ]   LINC00421 [ EBI - ARRAY_EXPRESS ]   LINC00421 [ SEEK ]   LINC00421 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00421 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287114
GTEX Portal (Tissue expression)LINC00421
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00421
DMDM Disease mutations100287114
Blocks (Seattle)LINC00421
Human Protein AtlasENSG00000236834
Protein Interaction databases
FunCoupENSG00000236834
BioGRIDLINC00421
STRING (EMBL)LINC00421
ZODIACLINC00421
Ontologies - Pathways
Huge Navigator LINC00421 [HugePedia]
snp3D : Map Gene to Disease100287114
BioCentury BCIQLINC00421
ClinGenLINC00421
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287114
Clinical trialLINC00421
Miscellaneous
canSAR (ICR)LINC00421 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00421
EVEXLINC00421
GoPubMedLINC00421
iHOPLINC00421
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:56:30 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.