Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC00437 (long intergenic non-protein coding RNA 437)


Alias (NCBI)TCONS_00021639
HGNC (Hugo) LINC00437
HGNC Alias symbTCONS_00021639
LocusID (NCBI) 101929121
Atlas_Id 65421
Location 13q13.3  [Link to chromosome band 13q13]
Location_base_pair Starts at 38532000 and ends at 38686675 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC00437   42772
Entrez_Gene (NCBI)LINC00437    long intergenic non-protein coding RNA 437
GeneCards (Weizmann)LINC00437
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr13:38532000-38686675 [Contig_View]  LINC00437 [Vega]
TCGA cBioPortalLINC00437
AceView (NCBI)LINC00437
Genatlas (Paris)LINC00437
SOURCE (Princeton)LINC00437
Genetics Home Reference (NIH)LINC00437
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00437  -     chr13:38532000-38686675 -  13q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00437  -     13q13.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC00437 - 13q13.3 [CytoView hg19]  LINC00437 - 13q13.3 [CytoView hg38]
Genome Data Viewer NCBILINC00437 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC040923 CD512930
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00437
Gene ExpressionLINC00437 [ NCBI-GEO ]   LINC00437 [ EBI - ARRAY_EXPRESS ]   LINC00437 [ SEEK ]   LINC00437 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00437 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00437 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101929121
GTEX Portal (Tissue expression)LINC00437
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00437
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:56:06 CEST 2021

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