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LINC00442 (long intergenic non-protein coding RNA 442)

Identity

Other alias-
HGNC (Hugo) LINC00442
LocusID (NCBI) 348021
Atlas_Id 65423
Location 13q12.11  [Link to chromosome band 13q12]
Location_base_pair Starts at 19008259 and ends at 19012634 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00442   42779
Cards
Entrez_Gene (NCBI)LINC00442  348021  long intergenic non-protein coding RNA 442
Aliases
GeneCards (Weizmann)LINC00442
Ensembl hg19 (Hinxton)ENSG00000232685 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232685 [Gene_View]  chr13:19008259-19012634 [Contig_View]  LINC00442 [Vega]
ICGC DataPortalENSG00000232685
TCGA cBioPortalLINC00442
AceView (NCBI)LINC00442
Genatlas (Paris)LINC00442
WikiGenes348021
SOURCE (Princeton)LINC00442
Genetics Home Reference (NIH)LINC00442
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00442  -     chr13:19008259-19012634 +  13q12.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00442  -     13q12.11   [Description]    (hg19-Feb_2009)
EnsemblLINC00442 - 13q12.11 [CytoView hg19]  LINC00442 - 13q12.11 [CytoView hg38]
Mapping of homologs : NCBILINC00442 [Mapview hg19]  LINC00442 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK301801 BC047425 BC067875 BC094789
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00442
Cluster EST : UnigeneHs.314114 [ NCBI ]
CGAP (NCI)Hs.314114
Alternative Splicing GalleryENSG00000232685
Gene ExpressionLINC00442 [ NCBI-GEO ]   LINC00442 [ EBI - ARRAY_EXPRESS ]   LINC00442 [ SEEK ]   LINC00442 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00442 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)348021
GTEX Portal (Tissue expression)LINC00442
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00442
DMDM Disease mutations348021
Blocks (Seattle)LINC00442
Human Protein AtlasENSG00000232685
IPIIPI00747837   
Protein Interaction databases
FunCoupENSG00000232685
BioGRIDLINC00442
STRING (EMBL)LINC00442
ZODIACLINC00442
Ontologies - Pathways
Huge Navigator LINC00442 [HugePedia]
snp3D : Map Gene to Disease348021
BioCentury BCIQLINC00442
ClinGenLINC00442
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD348021
Clinical trialLINC00442
Miscellaneous
canSAR (ICR)LINC00442 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00442
EVEXLINC00442
GoPubMedLINC00442
iHOPLINC00442
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:56:33 CEST 2017

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