Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC00445 (long intergenic non-protein coding RNA 445)


Alias (NCBI)-
HGNC (Hugo) LINC00445
LocusID (NCBI) 100507114
Atlas_Id 77730
Location 13q13.3  [Link to chromosome band 13q13]
Location_base_pair Starts at 35697524 and ends at 35699001 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC00445   42782
Entrez_Gene (NCBI)LINC00445    long intergenic non-protein coding RNA 445
GeneCards (Weizmann)LINC00445
Ensembl hg19 (Hinxton)ENSG00000236036 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236036 [Gene_View]  ENSG00000236036 [Sequence]  chr13:35697524-35699001 [Contig_View]  LINC00445 [Vega]
ICGC DataPortalENSG00000236036
TCGA cBioPortalLINC00445
AceView (NCBI)LINC00445
Genatlas (Paris)LINC00445
SOURCE (Princeton)LINC00445
Genetics Home Reference (NIH)LINC00445
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00445  -     chr13:35697524-35699001 +  13q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00445  -     13q13.3   [Description]    (hg19-Feb_2009)
GoldenPathLINC00445 - 13q13.3 [CytoView hg19]  LINC00445 - 13q13.3 [CytoView hg38]
genome Data Viewer NCBILINC00445 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA758568 AW450689
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00445
Alternative Splicing GalleryENSG00000236036
Gene ExpressionLINC00445 [ NCBI-GEO ]   LINC00445 [ EBI - ARRAY_EXPRESS ]   LINC00445 [ SEEK ]   LINC00445 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00445 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00445 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100507114
GTEX Portal (Tissue expression)LINC00445
Human Protein AtlasENSG00000236036-LINC00445 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00445
Blocks (Seattle)LINC00445
Human Protein Atlas [tissue]ENSG00000236036-LINC00445 [tissue]
Protein Interaction databases
Ontologies - Pathways
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:00:25 CET 2020

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