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LINC00445 (long intergenic non-protein coding RNA 445)

Identity

Other alias-
HGNC (Hugo) LINC00445
LocusID (NCBI) 100507114
Atlas_Id 77730
Location 13q13.3  [Link to chromosome band 13q13]
Location_base_pair Starts at 36271864 and ends at 36273392 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC00445   42782
Cards
Entrez_Gene (NCBI)LINC00445  100507114  long intergenic non-protein coding RNA 445
Aliases
GeneCards (Weizmann)LINC00445
Ensembl hg19 (Hinxton)ENSG00000236036 [Gene_View]  chr13:36271864-36273392 [Contig_View]  LINC00445 [Vega]
Ensembl hg38 (Hinxton)ENSG00000236036 [Gene_View]  chr13:36271864-36273392 [Contig_View]  LINC00445 [Vega]
ICGC DataPortalENSG00000236036
TCGA cBioPortalLINC00445
AceView (NCBI)LINC00445
Genatlas (Paris)LINC00445
WikiGenes100507114
SOURCE (Princeton)LINC00445
Genetics Home Reference (NIH)LINC00445
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00445  -     chr13:36271864-36273392 +  13q13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00445  -     13q13.3   [Description]    (hg38-Dec_2013)
EnsemblLINC00445 - 13q13.3 [CytoView hg19]  LINC00445 - 13q13.3 [CytoView hg38]
Mapping of homologs : NCBILINC00445 [Mapview hg19]  LINC00445 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000013 NC_018924 NT_024524 NW_004929388
Consensus coding sequences : CCDS (NCBI)LINC00445
Cluster EST : UnigeneHs.741798 [ NCBI ]
CGAP (NCI)Hs.741798
Alternative Splicing GalleryENSG00000236036
Gene ExpressionLINC00445 [ NCBI-GEO ]   LINC00445 [ EBI - ARRAY_EXPRESS ]   LINC00445 [ SEEK ]   LINC00445 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00445 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507114
GTEX Portal (Tissue expression)LINC00445
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00445
DMDM Disease mutations100507114
Blocks (Seattle)LINC00445
Human Protein AtlasENSG00000236036
Protein Interaction databases
FunCoupENSG00000236036
BioGRIDLINC00445
STRING (EMBL)LINC00445
ZODIACLINC00445
Ontologies - Pathways
Huge Navigator LINC00445 [HugePedia]
snp3D : Map Gene to Disease100507114
BioCentury BCIQLINC00445
ClinGenLINC00445
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507114
Clinical trialLINC00445
Miscellaneous
canSAR (ICR)LINC00445 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00445
EVEXLINC00445
GoPubMedLINC00445
iHOPLINC00445
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:11:42 CET 2017

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