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LINC00446 (long intergenic non-protein coding RNA 446)

Identity

Other alias-
HGNC (Hugo) LINC00446
LocusID (NCBI) 100874175
Atlas_Id 65425
Location 13q22.3  [Link to chromosome band 13q22]
Location_base_pair Starts at 78012883 and ends at 78053595 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00446   42783
Cards
Entrez_Gene (NCBI)LINC00446  100874175  long intergenic non-protein coding RNA 446
Aliases
GeneCards (Weizmann)LINC00446
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:78012883-78053595 [Contig_View]  LINC00446 [Vega]
TCGA cBioPortalLINC00446
AceView (NCBI)LINC00446
Genatlas (Paris)LINC00446
WikiGenes100874175
SOURCE (Princeton)LINC00446
Genetics Home Reference (NIH)LINC00446
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00446  -     chr13:78012883-78053595 +  13q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00446  -     13q22.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00446 - 13q22.3 [CytoView hg19]  LINC00446 - 13q22.3 [CytoView hg38]
Mapping of homologs : NCBILINC00446 [Mapview hg19]  LINC00446 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA906842 BX109374
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00446
Cluster EST : UnigeneHs.130364 [ NCBI ]
CGAP (NCI)Hs.130364
Gene ExpressionLINC00446 [ NCBI-GEO ]   LINC00446 [ EBI - ARRAY_EXPRESS ]   LINC00446 [ SEEK ]   LINC00446 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00446 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874175
GTEX Portal (Tissue expression)LINC00446
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00446
DMDM Disease mutations100874175
Blocks (Seattle)LINC00446
Protein Interaction databases
BioGRIDLINC00446
STRING (EMBL)LINC00446
ZODIACLINC00446
Ontologies - Pathways
Huge Navigator LINC00446 [HugePedia]
snp3D : Map Gene to Disease100874175
BioCentury BCIQLINC00446
ClinGenLINC00446
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874175
Clinical trialLINC00446
Miscellaneous
canSAR (ICR)LINC00446 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00446
EVEXLINC00446
GoPubMedLINC00446
iHOPLINC00446
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:08 CEST 2017

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