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LINC00449 (long intergenic non-protein coding RNA 449)

Identity

Other alias-
HGNC (Hugo) LINC00449
LocusID (NCBI) 106478991
Atlas_Id 77845
Location 13q32.3  [Link to chromosome band 13q32]
Location_base_pair Starts at 99499723 and ends at 99501063 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00449   42786
Cards
Entrez_Gene (NCBI)LINC00449  106478991  long intergenic non-protein coding RNA 449
Aliases
GeneCards (Weizmann)LINC00449
Ensembl hg19 (Hinxton)ENSG00000203441 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000203441 [Gene_View]  chr13:99499723-99501063 [Contig_View]  LINC00449 [Vega]
ICGC DataPortalENSG00000203441
TCGA cBioPortalLINC00449
AceView (NCBI)LINC00449
Genatlas (Paris)LINC00449
WikiGenes106478991
SOURCE (Princeton)LINC00449
Genetics Home Reference (NIH)LINC00449
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00449  -     chr13:99499723-99501063 -  13q32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00449  -     13q32.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00449 - 13q32.3 [CytoView hg19]  LINC00449 - 13q32.3 [CytoView hg38]
Mapping of homologs : NCBILINC00449 [Mapview hg19]  LINC00449 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00449
Alternative Splicing GalleryENSG00000203441
Gene ExpressionLINC00449 [ NCBI-GEO ]   LINC00449 [ EBI - ARRAY_EXPRESS ]   LINC00449 [ SEEK ]   LINC00449 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00449 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106478991
GTEX Portal (Tissue expression)LINC00449
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00449
DMDM Disease mutations106478991
Blocks (Seattle)LINC00449
Human Protein AtlasENSG00000203441
Protein Interaction databases
FunCoupENSG00000203441
BioGRIDLINC00449
STRING (EMBL)LINC00449
ZODIACLINC00449
Ontologies - Pathways
Huge Navigator LINC00449 [HugePedia]
snp3D : Map Gene to Disease106478991
BioCentury BCIQLINC00449
ClinGenLINC00449
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106478991
Clinical trialLINC00449
Miscellaneous
canSAR (ICR)LINC00449 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00449
EVEXLINC00449
GoPubMedLINC00449
iHOPLINC00449
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:08 CEST 2017

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