Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC00452 (long intergenic non-protein coding RNA 452)

Identity

Alias_namesLINC00453
long intergenic non-protein coding RNA 453
Other alias
HGNC (Hugo) LINC00452
LocusID (NCBI) 643365
Atlas_Id 65427
Location 13q34  [Link to chromosome band 13q34]
Location_base_pair Starts at 113895103 and ends at 113921317 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00452   42800
Cards
Entrez_Gene (NCBI)LINC00452  643365  long intergenic non-protein coding RNA 452
AliasesLINC00453
GeneCards (Weizmann)LINC00452
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:113895103-113921317 [Contig_View]  LINC00452 [Vega]
TCGA cBioPortalLINC00452
AceView (NCBI)LINC00452
Genatlas (Paris)LINC00452
WikiGenes643365
SOURCE (Princeton)LINC00452
Genetics Home Reference (NIH)LINC00452
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00452  -     chr13:113895103-113921317 +  13q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00452  -     13q34   [Description]    (hg19-Feb_2009)
EnsemblLINC00452 - 13q34 [CytoView hg19]  LINC00452 - 13q34 [CytoView hg38]
Mapping of homologs : NCBILINC00452 [Mapview hg19]  LINC00452 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA723779 AI201233 AI393115 AK126042 BC034570
RefSeq transcript (Entrez)NM_001039767 NM_001278674
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00452
Cluster EST : UnigeneHs.740982 [ NCBI ]
CGAP (NCI)Hs.740982
Gene ExpressionLINC00452 [ NCBI-GEO ]   LINC00452 [ EBI - ARRAY_EXPRESS ]   LINC00452 [ SEEK ]   LINC00452 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00452 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)643365
GTEX Portal (Tissue expression)LINC00452
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00452
DMDM Disease mutations643365
Blocks (Seattle)LINC00452
IPIIPI00418985   
Protein Interaction databases
BioGRIDLINC00452
STRING (EMBL)LINC00452
ZODIACLINC00452
Ontologies - Pathways
Huge Navigator LINC00452 [HugePedia]
snp3D : Map Gene to Disease643365
BioCentury BCIQLINC00452
ClinGenLINC00452
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD643365
Clinical trialLINC00452
Miscellaneous
canSAR (ICR)LINC00452 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00452
EVEXLINC00452
GoPubMedLINC00452
iHOPLINC00452
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:28:19 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.