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LINC00454 (long intergenic non-protein coding RNA 454)

Identity

Other alias-
HGNC (Hugo) LINC00454
LocusID (NCBI) 100874178
Atlas_Id 78769
Location 13q34  [Link to chromosome band 13q34]
Location_base_pair Starts at 113878629 and ends at 113883486 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00454   42802
Cards
Entrez_Gene (NCBI)LINC00454  100874178  long intergenic non-protein coding RNA 454
Aliases
GeneCards (Weizmann)LINC00454
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:113878629-113883486 [Contig_View]  LINC00454 [Vega]
TCGA cBioPortalLINC00454
AceView (NCBI)LINC00454
Genatlas (Paris)LINC00454
WikiGenes100874178
SOURCE (Princeton)LINC00454
Genetics Home Reference (NIH)LINC00454
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00454  -     chr13:113878629-113883486 -  13q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00454  -     13q34   [Description]    (hg19-Feb_2009)
EnsemblLINC00454 - 13q34 [CytoView hg19]  LINC00454 - 13q34 [CytoView hg38]
Mapping of homologs : NCBILINC00454 [Mapview hg19]  LINC00454 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BI829679
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00454
Cluster EST : UnigeneHs.547957 [ NCBI ]
CGAP (NCI)Hs.547957
Gene ExpressionLINC00454 [ NCBI-GEO ]   LINC00454 [ EBI - ARRAY_EXPRESS ]   LINC00454 [ SEEK ]   LINC00454 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00454 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874178
GTEX Portal (Tissue expression)LINC00454
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00454
DMDM Disease mutations100874178
Blocks (Seattle)LINC00454
Protein Interaction databases
BioGRIDLINC00454
STRING (EMBL)LINC00454
ZODIACLINC00454
Ontologies - Pathways
Huge Navigator LINC00454 [HugePedia]
snp3D : Map Gene to Disease100874178
BioCentury BCIQLINC00454
ClinGenLINC00454
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874178
Clinical trialLINC00454
Miscellaneous
canSAR (ICR)LINC00454 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00454
EVEXLINC00454
GoPubMedLINC00454
iHOPLINC00454
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:56:34 CEST 2017

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