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LINC00456 (long intergenic non-protein coding RNA 456)

Identity

Other alias-
HGNC (Hugo) LINC00456
LocusID (NCBI) 103625683
Atlas_Id 65428
Location 13q32.1  [Link to chromosome band 13q32]
Location_base_pair Starts at 97172382 and ends at 97179622 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00456   42804
Cards
Entrez_Gene (NCBI)LINC00456  103625683  long intergenic non-protein coding RNA 456
Aliases
GeneCards (Weizmann)LINC00456
Ensembl hg19 (Hinxton)ENSG00000233124 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233124 [Gene_View]  chr13:97172382-97179622 [Contig_View]  LINC00456 [Vega]
ICGC DataPortalENSG00000233124
TCGA cBioPortalLINC00456
AceView (NCBI)LINC00456
Genatlas (Paris)LINC00456
WikiGenes103625683
SOURCE (Princeton)LINC00456
Genetics Home Reference (NIH)LINC00456
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00456  -     chr13:97172382-97179622 -  13q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00456  -     13q32.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00456 - 13q32.1 [CytoView hg19]  LINC00456 - 13q32.1 [CytoView hg38]
Mapping of homologs : NCBILINC00456 [Mapview hg19]  LINC00456 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG623605
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00456
Cluster EST : UnigeneHs.679591 [ NCBI ]
CGAP (NCI)Hs.679591
Alternative Splicing GalleryENSG00000233124
Gene ExpressionLINC00456 [ NCBI-GEO ]   LINC00456 [ EBI - ARRAY_EXPRESS ]   LINC00456 [ SEEK ]   LINC00456 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00456 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)103625683
GTEX Portal (Tissue expression)LINC00456
Human Protein AtlasENSG00000233124-LINC00456 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00456
DMDM Disease mutations103625683
Blocks (Seattle)LINC00456
Human Protein Atlas [tissue]ENSG00000233124-LINC00456 [tissue]
Protein Interaction databases
FunCoupENSG00000233124
BioGRIDLINC00456
STRING (EMBL)LINC00456
ZODIACLINC00456
Ontologies - Pathways
Huge Navigator LINC00456 [HugePedia]
snp3D : Map Gene to Disease103625683
BioCentury BCIQLINC00456
ClinGenLINC00456
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD103625683
Clinical trialLINC00456
Miscellaneous
canSAR (ICR)LINC00456 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00456
EVEXLINC00456
GoPubMedLINC00456
iHOPLINC00456
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:28:19 CET 2017

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