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LINC00457 (long intergenic non-protein coding RNA 457)

Identity

Other alias-
HGNC (Hugo) LINC00457
LocusID (NCBI) 100874179
Atlas_Id 65429
Location 13q13.2  [Link to chromosome band 13q13]
Location_base_pair Starts at 35009591 and ends at 35214822 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00457   42805
Cards
Entrez_Gene (NCBI)LINC00457  100874179  long intergenic non-protein coding RNA 457
Aliases
GeneCards (Weizmann)LINC00457
Ensembl hg19 (Hinxton)ENSG00000225179 [Gene_View]  chr13:35009591-35214822 [Contig_View]  LINC00457 [Vega]
Ensembl hg38 (Hinxton)ENSG00000225179 [Gene_View]  chr13:35009591-35214822 [Contig_View]  LINC00457 [Vega]
ICGC DataPortalENSG00000225179
TCGA cBioPortalLINC00457
AceView (NCBI)LINC00457
Genatlas (Paris)LINC00457
WikiGenes100874179
SOURCE (Princeton)LINC00457
Genetics Home Reference (NIH)LINC00457
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00457  -     chr13:35009591-35214822 -  13q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00457  -     13q13.2   [Description]    (hg38-Dec_2013)
EnsemblLINC00457 - 13q13.2 [CytoView hg19]  LINC00457 - 13q13.2 [CytoView hg38]
Mapping of homologs : NCBILINC00457 [Mapview hg19]  LINC00457 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI201900 AI972930 HG505542 HG505543
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000013 NC_018924 NT_024524 NW_004929388
Consensus coding sequences : CCDS (NCBI)LINC00457
Cluster EST : UnigeneHs.569253 [ NCBI ]
CGAP (NCI)Hs.569253
Alternative Splicing GalleryENSG00000225179
Gene ExpressionLINC00457 [ NCBI-GEO ]   LINC00457 [ EBI - ARRAY_EXPRESS ]   LINC00457 [ SEEK ]   LINC00457 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00457 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874179
GTEX Portal (Tissue expression)LINC00457
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00457
DMDM Disease mutations100874179
Blocks (Seattle)LINC00457
Human Protein AtlasENSG00000225179
Protein Interaction databases
FunCoupENSG00000225179
BioGRIDLINC00457
STRING (EMBL)LINC00457
ZODIACLINC00457
Ontologies - Pathways
Huge Navigator LINC00457 [HugePedia]
snp3D : Map Gene to Disease100874179
BioCentury BCIQLINC00457
ClinGenLINC00457
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874179
Clinical trialLINC00457
Miscellaneous
canSAR (ICR)LINC00457 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00457
EVEXLINC00457
GoPubMedLINC00457
iHOPLINC00457
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:11:43 CET 2017

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