Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC00457 (long intergenic non-protein coding RNA 457)


Alias (NCBI)-
HGNC (Hugo) LINC00457
LocusID (NCBI) 100874179
Atlas_Id 65429
Location 13q13.2  [Link to chromosome band 13q13]
Location_base_pair Starts at 34435451 and ends at 34640685 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC00457   42805
Entrez_Gene (NCBI)LINC00457    long intergenic non-protein coding RNA 457
GeneCards (Weizmann)LINC00457
Ensembl hg19 (Hinxton)ENSG00000225179 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225179 [Gene_View]  ENSG00000225179 [Sequence]  chr13:34435451-34640685 [Contig_View]  LINC00457 [Vega]
ICGC DataPortalENSG00000225179
TCGA cBioPortalLINC00457
AceView (NCBI)LINC00457
Genatlas (Paris)LINC00457
SOURCE (Princeton)LINC00457
Genetics Home Reference (NIH)LINC00457
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00457  -     chr13:34435451-34640685 -  13q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00457  -     13q13.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC00457 - 13q13.2 [CytoView hg19]  LINC00457 - 13q13.2 [CytoView hg38]
genome Data Viewer NCBILINC00457 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI201900 AI972930
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00457
Alternative Splicing GalleryENSG00000225179
Gene ExpressionLINC00457 [ NCBI-GEO ]   LINC00457 [ EBI - ARRAY_EXPRESS ]   LINC00457 [ SEEK ]   LINC00457 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00457 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00457 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100874179
GTEX Portal (Tissue expression)LINC00457
Human Protein AtlasENSG00000225179-LINC00457 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00457
Blocks (Seattle)LINC00457
Human Protein Atlas [tissue]ENSG00000225179-LINC00457 [tissue]
Protein Interaction databases
Ontologies - Pathways
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:00:26 CET 2020

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