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LINC00466 (long intergenic non-protein coding RNA 466)

Identity

Other alias-
HGNC (Hugo) LINC00466
LocusID (NCBI) 199899
Atlas_Id 65435
Location 1p31.3  [Link to chromosome band 1p31]
Location_base_pair Starts at 63624754 and ends at 63782901 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
LINC00466 (1p31.3) / RFC2 (7q11.23)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00466   27294
Cards
Entrez_Gene (NCBI)LINC00466  199899  long intergenic non-protein coding RNA 466
Aliases
GeneCards (Weizmann)LINC00466
Ensembl hg19 (Hinxton) [Gene_View]  chr1:63624754-63782901 [Contig_View]  LINC00466 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:63624754-63782901 [Contig_View]  LINC00466 [Vega]
TCGA cBioPortalLINC00466
AceView (NCBI)LINC00466
Genatlas (Paris)LINC00466
WikiGenes199899
SOURCE (Princeton)LINC00466
Genetics Home Reference (NIH)LINC00466
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00466  -     chr1:63624754-63782901 -  1p31.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00466  -     1p31.3   [Description]    (hg38-Dec_2013)
EnsemblLINC00466 - 1p31.3 [CytoView hg19]  LINC00466 - 1p31.3 [CytoView hg38]
Mapping of homologs : NCBILINC00466 [Mapview hg19]  LINC00466 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC040309 HG492124 HG492125 HG492127
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)LINC00466
Cluster EST : UnigeneHs.116210 [ NCBI ]
CGAP (NCI)Hs.116210
Gene ExpressionLINC00466 [ NCBI-GEO ]   LINC00466 [ EBI - ARRAY_EXPRESS ]   LINC00466 [ SEEK ]   LINC00466 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00466 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)199899
GTEX Portal (Tissue expression)LINC00466
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00466
DMDM Disease mutations199899
Blocks (Seattle)LINC00466
Protein Interaction databases
BioGRIDLINC00466
STRING (EMBL)LINC00466
ZODIACLINC00466
Ontologies - Pathways
Huge Navigator LINC00466 [HugePedia]
snp3D : Map Gene to Disease199899
BioCentury BCIQLINC00466
ClinGenLINC00466
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD199899
Clinical trialLINC00466
Miscellaneous
canSAR (ICR)LINC00466 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00466
EVEXLINC00466
GoPubMedLINC00466
iHOPLINC00466
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:11:44 CET 2017

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