Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC00484 (long intergenic non-protein coding RNA 484)


Alias (NCBI)C9orf73
HGNC (Hugo) LINC00484
HGNC Previous nameC9orf73
HGNC Previous namechromosome 9 open reading frame 73
LocusID (NCBI) 100129347
Atlas_Id 65449
Location 9q22.2  [Link to chromosome band 9q22]
Location_base_pair Starts at 91119062 and ends at 91182762 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC00484   27862
Entrez_Gene (NCBI)LINC00484    long intergenic non-protein coding RNA 484
GeneCards (Weizmann)LINC00484
Ensembl hg19 (Hinxton)ENSG00000229694 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229694 [Gene_View]  ENSG00000229694 [Sequence]  chr9:91119062-91182762 [Contig_View]  LINC00484 [Vega]
ICGC DataPortalENSG00000229694
TCGA cBioPortalLINC00484
AceView (NCBI)LINC00484
Genatlas (Paris)LINC00484
SOURCE (Princeton)LINC00484
Genetics Home Reference (NIH)LINC00484
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00484  -     chr9:91119062-91182762 +  9q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00484  -     9q22.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC00484 - 9q22.2 [CytoView hg19]  LINC00484 - 9q22.2 [CytoView hg38]
genome Data Viewer NCBILINC00484 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI417584 AK095132 DB291835
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00484
Alternative Splicing GalleryENSG00000229694
Gene ExpressionLINC00484 [ NCBI-GEO ]   LINC00484 [ EBI - ARRAY_EXPRESS ]   LINC00484 [ SEEK ]   LINC00484 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00484 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00484 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100129347
GTEX Portal (Tissue expression)LINC00484
Human Protein AtlasENSG00000229694-LINC00484 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00484
Blocks (Seattle)LINC00484
Human Protein Atlas [tissue]ENSG00000229694-LINC00484 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:00:29 CET 2020

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