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LINC00484 (long intergenic non-protein coding RNA 484)

Identity

Alias (NCBI)C9orf73
HGNC (Hugo) LINC00484
HGNC Previous nameC9orf73
HGNC Previous namechromosome 9 open reading frame 73
LocusID (NCBI) 100129347
Atlas_Id 65449
Location 9q22.2  [Link to chromosome band 9q22]
Location_base_pair Starts at 91119062 and ends at 91182762 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)LINC00484   27862
Cards
Entrez_Gene (NCBI)LINC00484    long intergenic non-protein coding RNA 484
AliasesC9orf73
GeneCards (Weizmann)LINC00484
Ensembl hg19 (Hinxton)ENSG00000229694 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229694 [Gene_View]  ENSG00000229694 [Sequence]  chr9:91119062-91182762 [Contig_View]  LINC00484 [Vega]
ICGC DataPortalENSG00000229694
TCGA cBioPortalLINC00484
AceView (NCBI)LINC00484
Genatlas (Paris)LINC00484
SOURCE (Princeton)LINC00484
Genetics Home Reference (NIH)LINC00484
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00484  -     chr9:91119062-91182762 +  9q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00484  -     9q22.2   [Description]    (hg19-Feb_2009)
GoldenPathLINC00484 - 9q22.2 [CytoView hg19]  LINC00484 - 9q22.2 [CytoView hg38]
ImmunoBaseENSG00000229694
genome Data Viewer NCBILINC00484 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI417584 AK095132 DB291835
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00484
Alternative Splicing GalleryENSG00000229694
Gene ExpressionLINC00484 [ NCBI-GEO ]   LINC00484 [ EBI - ARRAY_EXPRESS ]   LINC00484 [ SEEK ]   LINC00484 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00484 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00484 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100129347
GTEX Portal (Tissue expression)LINC00484
Human Protein AtlasENSG00000229694-LINC00484 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00484
Blocks (Seattle)LINC00484
Human Protein Atlas [tissue]ENSG00000229694-LINC00484 [tissue]
Protein Interaction databases
BioGRIDLINC00484
STRING (EMBL)LINC00484
ZODIACLINC00484
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00484
EVEXLINC00484
GoPubMedLINC00484
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Sat Dec 5 17:00:29 CET 2020

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