Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC00484 (long intergenic non-protein coding RNA 484)

Identity

Alias_namesC9orf73
chromosome 9 open reading frame 73
Other alias
HGNC (Hugo) LINC00484
LocusID (NCBI) 100129347
Atlas_Id 65449
Location 9q22.31  [Link to chromosome band 9q22]
Location_base_pair Starts at 93922051 and ends at 93927858 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC00484   27862
Cards
Entrez_Gene (NCBI)LINC00484  100129347  long intergenic non-protein coding RNA 484
AliasesC9orf73
GeneCards (Weizmann)LINC00484
Ensembl hg19 (Hinxton)ENSG00000235641 [Gene_View]  chr9:93922051-93927858 [Contig_View]  LINC00484 [Vega]
Ensembl hg38 (Hinxton)ENSG00000235641 [Gene_View]  chr9:93922051-93927858 [Contig_View]  LINC00484 [Vega]
ICGC DataPortalENSG00000235641
TCGA cBioPortalLINC00484
AceView (NCBI)LINC00484
Genatlas (Paris)LINC00484
WikiGenes100129347
SOURCE (Princeton)LINC00484
Genetics Home Reference (NIH)LINC00484
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00484  -     chr9:93922051-93927858 +  9q22.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00484  -     9q22.31   [Description]    (hg38-Dec_2013)
EnsemblLINC00484 - 9q22.31 [CytoView hg19]  LINC00484 - 9q22.31 [CytoView hg38]
Mapping of homologs : NCBILINC00484 [Mapview hg19]  LINC00484 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095132 HG502231 HG502232 HG502233 HG502234
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008470 NW_004929366
Consensus coding sequences : CCDS (NCBI)LINC00484
Cluster EST : UnigeneHs.535950 [ NCBI ]
CGAP (NCI)Hs.535950
Alternative Splicing GalleryENSG00000235641
Gene ExpressionLINC00484 [ NCBI-GEO ]   LINC00484 [ EBI - ARRAY_EXPRESS ]   LINC00484 [ SEEK ]   LINC00484 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00484 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100129347
GTEX Portal (Tissue expression)LINC00484
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00484
DMDM Disease mutations100129347
Blocks (Seattle)LINC00484
Human Protein AtlasENSG00000235641
Protein Interaction databases
FunCoupENSG00000235641
BioGRIDLINC00484
STRING (EMBL)LINC00484
ZODIACLINC00484
Ontologies - Pathways
Huge Navigator LINC00484 [HugePedia]
snp3D : Map Gene to Disease100129347
BioCentury BCIQLINC00484
ClinGenLINC00484
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129347
Chemical/Pharm GKB GenePA134878692
Clinical trialLINC00484
Miscellaneous
canSAR (ICR)LINC00484 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00484
EVEXLINC00484
GoPubMedLINC00484
iHOPLINC00484
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:11:47 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.