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LINC00485 (long intergenic non-protein coding RNA 485)

Identity

Other alias-
HGNC (Hugo) LINC00485
LocusID (NCBI) 283432
Atlas_Id 65450
Location 12q23.2  [Link to chromosome band 12q23]
Location_base_pair Starts at 103203061 and ends at 103218177 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00485   27476
Cards
Entrez_Gene (NCBI)LINC00485  283432  long intergenic non-protein coding RNA 485
Aliases
GeneCards (Weizmann)LINC00485
Ensembl hg19 (Hinxton)ENSG00000258169 [Gene_View]  chr12:103203061-103218177 [Contig_View]  LINC00485 [Vega]
Ensembl hg38 (Hinxton)ENSG00000258169 [Gene_View]  chr12:103203061-103218177 [Contig_View]  LINC00485 [Vega]
ICGC DataPortalENSG00000258169
TCGA cBioPortalLINC00485
AceView (NCBI)LINC00485
Genatlas (Paris)LINC00485
WikiGenes283432
SOURCE (Princeton)LINC00485
Genetics Home Reference (NIH)LINC00485
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00485  -     chr12:103203061-103218177 -  12q23.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00485  -     12q23.2   [Description]    (hg38-Dec_2013)
EnsemblLINC00485 - 12q23.2 [CytoView hg19]  LINC00485 - 12q23.2 [CytoView hg38]
Mapping of homologs : NCBILINC00485 [Mapview hg19]  LINC00485 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC037211 HG505122
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000012 NC_018923 NT_029419 NW_004929384
Consensus coding sequences : CCDS (NCBI)LINC00485
Cluster EST : UnigeneHs.382110 [ NCBI ]
CGAP (NCI)Hs.382110
Alternative Splicing GalleryENSG00000258169
Gene ExpressionLINC00485 [ NCBI-GEO ]   LINC00485 [ EBI - ARRAY_EXPRESS ]   LINC00485 [ SEEK ]   LINC00485 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00485 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)283432
GTEX Portal (Tissue expression)LINC00485
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00485
DMDM Disease mutations283432
Blocks (Seattle)LINC00485
Human Protein AtlasENSG00000258169
Protein Interaction databases
FunCoupENSG00000258169
BioGRIDLINC00485
STRING (EMBL)LINC00485
ZODIACLINC00485
Ontologies - Pathways
Huge Navigator LINC00485 [HugePedia]
snp3D : Map Gene to Disease283432
BioCentury BCIQLINC00485
ClinGenLINC00485
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283432
Clinical trialLINC00485
Miscellaneous
canSAR (ICR)LINC00485 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00485
EVEXLINC00485
GoPubMedLINC00485
iHOPLINC00485
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:11:47 CET 2017

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