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LINC00486 (long intergenic non-protein coding RNA 486)

Identity

Other alias-
HGNC (Hugo) LINC00486
LocusID (NCBI) 285045
Atlas_Id 65451
Location 2p22.3  [Link to chromosome band 2p22]
Location_base_pair Starts at 33050510 and ends at 33154206 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00486   42946
Cards
Entrez_Gene (NCBI)LINC00486  285045  long intergenic non-protein coding RNA 486
Aliases
GeneCards (Weizmann)LINC00486
Ensembl hg19 (Hinxton)ENSG00000230876 [Gene_View]  chr2:33050510-33154206 [Contig_View]  LINC00486 [Vega]
Ensembl hg38 (Hinxton)ENSG00000230876 [Gene_View]  chr2:33050510-33154206 [Contig_View]  LINC00486 [Vega]
ICGC DataPortalENSG00000230876
TCGA cBioPortalLINC00486
AceView (NCBI)LINC00486
Genatlas (Paris)LINC00486
WikiGenes285045
SOURCE (Princeton)LINC00486
Genetics Home Reference (NIH)LINC00486
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00486  -     chr2:33050510-33154206 +  2p22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00486  -     2p22.3   [Description]    (hg38-Dec_2013)
EnsemblLINC00486 - 2p22.3 [CytoView hg19]  LINC00486 - 2p22.3 [CytoView hg38]
Mapping of homologs : NCBILINC00486 [Mapview hg19]  LINC00486 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095182 BC040883 BC121144 BC121145 HG493816
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_022184 NW_004929300
Consensus coding sequences : CCDS (NCBI)LINC00486
Cluster EST : UnigeneHs.434660 [ NCBI ]
CGAP (NCI)Hs.434660
Alternative Splicing GalleryENSG00000230876
Gene ExpressionLINC00486 [ NCBI-GEO ]   LINC00486 [ EBI - ARRAY_EXPRESS ]   LINC00486 [ SEEK ]   LINC00486 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00486 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)285045
GTEX Portal (Tissue expression)LINC00486
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00486
DMDM Disease mutations285045
Blocks (Seattle)LINC00486
Human Protein AtlasENSG00000230876
IPIIPI00976757   
Protein Interaction databases
FunCoupENSG00000230876
BioGRIDLINC00486
STRING (EMBL)LINC00486
ZODIACLINC00486
Ontologies - Pathways
Huge Navigator LINC00486 [HugePedia]
snp3D : Map Gene to Disease285045
BioCentury BCIQLINC00486
ClinGenLINC00486
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285045
Clinical trialLINC00486
Miscellaneous
canSAR (ICR)LINC00486 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00486
EVEXLINC00486
GoPubMedLINC00486
iHOPLINC00486
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:11:47 CET 2017

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