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LINC00489 (long intergenic non-protein coding RNA 489)

Identity

Other alias-
HGNC (Hugo) LINC00489
LocusID (NCBI) 100861522
Atlas_Id 65453
Location 20q11.23  [Link to chromosome band 20q11]
Location_base_pair Starts at 37619298 and ends at 37623119 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00489   43426
Cards
Entrez_Gene (NCBI)LINC00489  100861522  long intergenic non-protein coding RNA 489
Aliases
GeneCards (Weizmann)LINC00489
Ensembl hg19 (Hinxton)ENSG00000225759 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225759 [Gene_View]  chr20:37619298-37623119 [Contig_View]  LINC00489 [Vega]
ICGC DataPortalENSG00000225759
TCGA cBioPortalLINC00489
AceView (NCBI)LINC00489
Genatlas (Paris)LINC00489
WikiGenes100861522
SOURCE (Princeton)LINC00489
Genetics Home Reference (NIH)LINC00489
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00489  -     chr20:37619298-37623119 -  20q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00489  -     20q11.23   [Description]    (hg19-Feb_2009)
EnsemblLINC00489 - 20q11.23 [CytoView hg19]  LINC00489 - 20q11.23 [CytoView hg38]
Mapping of homologs : NCBILINC00489 [Mapview hg19]  LINC00489 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DB341379
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00489
Cluster EST : UnigeneHs.580680 [ NCBI ]
CGAP (NCI)Hs.580680
Alternative Splicing GalleryENSG00000225759
Gene ExpressionLINC00489 [ NCBI-GEO ]   LINC00489 [ EBI - ARRAY_EXPRESS ]   LINC00489 [ SEEK ]   LINC00489 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00489 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100861522
GTEX Portal (Tissue expression)LINC00489
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00489
DMDM Disease mutations100861522
Blocks (Seattle)LINC00489
Human Protein AtlasENSG00000225759
Protein Interaction databases
FunCoupENSG00000225759
BioGRIDLINC00489
STRING (EMBL)LINC00489
ZODIACLINC00489
Ontologies - Pathways
Huge Navigator LINC00489 [HugePedia]
snp3D : Map Gene to Disease100861522
BioCentury BCIQLINC00489
ClinGenLINC00489
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100861522
Clinical trialLINC00489
Miscellaneous
canSAR (ICR)LINC00489 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00489
EVEXLINC00489
GoPubMedLINC00489
iHOPLINC00489
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:13:12 CEST 2017

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