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LINC00494 (long intergenic non-protein coding RNA 494)

Identity

Other alias-
HGNC (Hugo) LINC00494
LocusID (NCBI) 284749
Atlas_Id 65457
Location 20q13.13  [Link to chromosome band 20q13]
Location_base_pair Starts at 48359911 and ends at 48370638 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00494   27657
Cards
Entrez_Gene (NCBI)LINC00494  284749  long intergenic non-protein coding RNA 494
Aliases
GeneCards (Weizmann)LINC00494
Ensembl hg19 (Hinxton)ENSG00000235621 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235621 [Gene_View]  chr20:48359911-48370638 [Contig_View]  LINC00494 [Vega]
ICGC DataPortalENSG00000235621
TCGA cBioPortalLINC00494
AceView (NCBI)LINC00494
Genatlas (Paris)LINC00494
WikiGenes284749
SOURCE (Princeton)LINC00494
Genetics Home Reference (NIH)LINC00494
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00494  -     chr20:48359911-48370638 +  20q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00494  -     20q13.13   [Description]    (hg19-Feb_2009)
EnsemblLINC00494 - 20q13.13 [CytoView hg19]  LINC00494 - 20q13.13 [CytoView hg38]
Mapping of homologs : NCBILINC00494 [Mapview hg19]  LINC00494 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA400799 AL832259 BC035164 BC122555 DB034461
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00494
Cluster EST : UnigeneHs.299080 [ NCBI ]
CGAP (NCI)Hs.299080
Alternative Splicing GalleryENSG00000235621
Gene ExpressionLINC00494 [ NCBI-GEO ]   LINC00494 [ EBI - ARRAY_EXPRESS ]   LINC00494 [ SEEK ]   LINC00494 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00494 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)284749
GTEX Portal (Tissue expression)LINC00494
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00494
DMDM Disease mutations284749
Blocks (Seattle)LINC00494
Human Protein AtlasENSG00000235621
IPIIPI00845234   
Protein Interaction databases
FunCoupENSG00000235621
BioGRIDLINC00494
STRING (EMBL)LINC00494
ZODIACLINC00494
Ontologies - Pathways
Huge Navigator LINC00494 [HugePedia]
snp3D : Map Gene to Disease284749
BioCentury BCIQLINC00494
ClinGenLINC00494
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284749
Clinical trialLINC00494
Miscellaneous
canSAR (ICR)LINC00494 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00494
EVEXLINC00494
GoPubMedLINC00494
iHOPLINC00494
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:13 CEST 2017

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