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LINC00501 (long intergenic non-protein coding RNA 501)

Identity

Other alias-
HGNC (Hugo) LINC00501
LocusID (NCBI) 100820709
Atlas_Id 65459
Location 3q26.32  [Link to chromosome band 3q26]
Location_base_pair Starts at 177294442 and ends at 177323435 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00501   43439
Cards
Entrez_Gene (NCBI)LINC00501  100820709  long intergenic non-protein coding RNA 501
Aliases
GeneCards (Weizmann)LINC00501
Ensembl hg19 (Hinxton)ENSG00000203645 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000203645 [Gene_View]  chr3:177294442-177323435 [Contig_View]  LINC00501 [Vega]
ICGC DataPortalENSG00000203645
TCGA cBioPortalLINC00501
AceView (NCBI)LINC00501
Genatlas (Paris)LINC00501
WikiGenes100820709
SOURCE (Princeton)LINC00501
Genetics Home Reference (NIH)LINC00501
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00501  -     chr3:177294442-177323435 +  3q26.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00501  -     3q26.32   [Description]    (hg19-Feb_2009)
EnsemblLINC00501 - 3q26.32 [CytoView hg19]  LINC00501 - 3q26.32 [CytoView hg38]
Mapping of homologs : NCBILINC00501 [Mapview hg19]  LINC00501 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055528
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00501
Cluster EST : UnigeneHs.518409 [ NCBI ]
CGAP (NCI)Hs.518409
Alternative Splicing GalleryENSG00000203645
Gene ExpressionLINC00501 [ NCBI-GEO ]   LINC00501 [ EBI - ARRAY_EXPRESS ]   LINC00501 [ SEEK ]   LINC00501 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00501 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100820709
GTEX Portal (Tissue expression)LINC00501
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00501
DMDM Disease mutations100820709
Blocks (Seattle)LINC00501
Human Protein AtlasENSG00000203645
Protein Interaction databases
FunCoupENSG00000203645
BioGRIDLINC00501
STRING (EMBL)LINC00501
ZODIACLINC00501
Ontologies - Pathways
Huge Navigator LINC00501 [HugePedia]
snp3D : Map Gene to Disease100820709
BioCentury BCIQLINC00501
ClinGenLINC00501
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100820709
Clinical trialLINC00501
Miscellaneous
canSAR (ICR)LINC00501 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00501
EVEXLINC00501
GoPubMedLINC00501
iHOPLINC00501
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:13:13 CEST 2017

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