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LINC00502 (long intergenic non-protein coding RNA 502)

Identity

Other alias-
HGNC (Hugo) LINC00502
LocusID (NCBI) 100874184
Atlas_Id 65460
Location 10q23.31  [Link to chromosome band 10q23]
Location_base_pair Starts at 91045808 and ends at 91062159 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00502   43442
Cards
Entrez_Gene (NCBI)LINC00502  100874184  long intergenic non-protein coding RNA 502
Aliases
GeneCards (Weizmann)LINC00502
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:91045808-91062159 [Contig_View]  LINC00502 [Vega]
TCGA cBioPortalLINC00502
AceView (NCBI)LINC00502
Genatlas (Paris)LINC00502
WikiGenes100874184
SOURCE (Princeton)LINC00502
Genetics Home Reference (NIH)LINC00502
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00502  -     chr10:91045808-91062159 +  10q23.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00502  -     10q23.31   [Description]    (hg19-Feb_2009)
EnsemblLINC00502 - 10q23.31 [CytoView hg19]  LINC00502 - 10q23.31 [CytoView hg38]
Mapping of homologs : NCBILINC00502 [Mapview hg19]  LINC00502 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW169934 DB339345
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00502
Cluster EST : UnigeneHs.512240 [ NCBI ]
CGAP (NCI)Hs.512240
Gene ExpressionLINC00502 [ NCBI-GEO ]   LINC00502 [ EBI - ARRAY_EXPRESS ]   LINC00502 [ SEEK ]   LINC00502 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00502 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874184
GTEX Portal (Tissue expression)LINC00502
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00502
DMDM Disease mutations100874184
Blocks (Seattle)LINC00502
Protein Interaction databases
BioGRIDLINC00502
STRING (EMBL)LINC00502
ZODIACLINC00502
Ontologies - Pathways
Huge Navigator LINC00502 [HugePedia]
snp3D : Map Gene to Disease100874184
BioCentury BCIQLINC00502
ClinGenLINC00502
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874184
Clinical trialLINC00502
Miscellaneous
canSAR (ICR)LINC00502 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00502
EVEXLINC00502
GoPubMedLINC00502
iHOPLINC00502
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:21:47 CET 2017

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