Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC00507 (long intergenic non-protein coding RNA 507)

Identity

Other alias-
HGNC (Hugo) LINC00507
LocusID (NCBI) 100862680
Atlas_Id 65463
Location 12q24.32  [Link to chromosome band 12q24]
Location_base_pair Starts at 127915410 and ends at 127951552 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00507   43558
Cards
Entrez_Gene (NCBI)LINC00507  100862680  long intergenic non-protein coding RNA 507
Aliases
GeneCards (Weizmann)LINC00507
Ensembl hg19 (Hinxton)ENSG00000256193 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000256193 [Gene_View]  chr12:127915410-127951552 [Contig_View]  LINC00507 [Vega]
ICGC DataPortalENSG00000256193
TCGA cBioPortalLINC00507
AceView (NCBI)LINC00507
Genatlas (Paris)LINC00507
WikiGenes100862680
SOURCE (Princeton)LINC00507
Genetics Home Reference (NIH)LINC00507
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00507  -     chr12:127915410-127951552 +  12q24.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00507  -     12q24.32   [Description]    (hg19-Feb_2009)
EnsemblLINC00507 - 12q24.32 [CytoView hg19]  LINC00507 - 12q24.32 [CytoView hg38]
Mapping of homologs : NCBILINC00507 [Mapview hg19]  LINC00507 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC037880 BC045798
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00507
Cluster EST : UnigeneHs.385496 [ NCBI ]
CGAP (NCI)Hs.385496
Alternative Splicing GalleryENSG00000256193
Gene ExpressionLINC00507 [ NCBI-GEO ]   LINC00507 [ EBI - ARRAY_EXPRESS ]   LINC00507 [ SEEK ]   LINC00507 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00507 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100862680
GTEX Portal (Tissue expression)LINC00507
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00507
DMDM Disease mutations100862680
Blocks (Seattle)LINC00507
Human Protein AtlasENSG00000256193
Protein Interaction databases
FunCoupENSG00000256193
BioGRIDLINC00507
STRING (EMBL)LINC00507
ZODIACLINC00507
Ontologies - Pathways
Huge Navigator LINC00507 [HugePedia]
snp3D : Map Gene to Disease100862680
BioCentury BCIQLINC00507
ClinGenLINC00507
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100862680
Clinical trialLINC00507
Miscellaneous
canSAR (ICR)LINC00507 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00507
EVEXLINC00507
GoPubMedLINC00507
iHOPLINC00507
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:20:21 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.