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LINC00513 (long intergenic non-protein coding RNA 513)

Identity

Alias_symbol (synonym)AC016831.7
Other alias-
HGNC (Hugo) LINC00513
LocusID (NCBI) 100506860
Atlas_Id 79148
Location 7q32.3  [Link to chromosome band 7q32]
Location_base_pair Starts at 130913464 and ends at 130921946 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00513   43566
Cards
Entrez_Gene (NCBI)LINC00513  100506860  long intergenic non-protein coding RNA 513
Aliases
GeneCards (Weizmann)LINC00513
Ensembl hg19 (Hinxton)ENSG00000233559 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233559 [Gene_View]  chr7:130913464-130921946 [Contig_View]  LINC00513 [Vega]
ICGC DataPortalENSG00000233559
TCGA cBioPortalLINC00513
AceView (NCBI)LINC00513
Genatlas (Paris)LINC00513
WikiGenes100506860
SOURCE (Princeton)LINC00513
Genetics Home Reference (NIH)LINC00513
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00513  -     chr7:130913464-130921946 +  7q32.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00513  -     7q32.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00513 - 7q32.3 [CytoView hg19]  LINC00513 - 7q32.3 [CytoView hg38]
Mapping of homologs : NCBILINC00513 [Mapview hg19]  LINC00513 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW138292 BM763100
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00513
Cluster EST : UnigeneHs.635013 [ NCBI ]
CGAP (NCI)Hs.635013
Alternative Splicing GalleryENSG00000233559
Gene ExpressionLINC00513 [ NCBI-GEO ]   LINC00513 [ EBI - ARRAY_EXPRESS ]   LINC00513 [ SEEK ]   LINC00513 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00513 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506860
GTEX Portal (Tissue expression)LINC00513
Human Protein AtlasENSG00000233559-LINC00513 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00513
DMDM Disease mutations100506860
Blocks (Seattle)LINC00513
Human Protein Atlas [tissue]ENSG00000233559-LINC00513 [tissue]
Protein Interaction databases
FunCoupENSG00000233559
BioGRIDLINC00513
STRING (EMBL)LINC00513
ZODIACLINC00513
Ontologies - Pathways
Huge Navigator LINC00513 [HugePedia]
snp3D : Map Gene to Disease100506860
BioCentury BCIQLINC00513
ClinGenLINC00513
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506860
Clinical trialLINC00513
Miscellaneous
canSAR (ICR)LINC00513 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00513
EVEXLINC00513
GoPubMedLINC00513
iHOPLINC00513
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:16:22 CET 2017

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