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LINC00514 (long intergenic non-protein coding RNA 514)

Identity

Other aliasLA16c-380H5.1
HGNC (Hugo) LINC00514
LocusID (NCBI) 283875
Atlas_Id 65466
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 2989054 and ends at 2994509 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00514   27549
Cards
Entrez_Gene (NCBI)LINC00514  283875  long intergenic non-protein coding RNA 514
AliasesLA16c-380H5.1
GeneCards (Weizmann)LINC00514
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:2989054-2994509 [Contig_View]  LINC00514 [Vega]
TCGA cBioPortalLINC00514
AceView (NCBI)LINC00514
Genatlas (Paris)LINC00514
WikiGenes283875
SOURCE (Princeton)LINC00514
Genetics Home Reference (NIH)LINC00514
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00514  -     chr16:2989054-2994509 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00514  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00514 - 16p13.3 [CytoView hg19]  LINC00514 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBILINC00514 [Mapview hg19]  LINC00514 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK098017 AK128266
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00514
Cluster EST : UnigeneHs.738691 [ NCBI ]
CGAP (NCI)Hs.738691
Gene ExpressionLINC00514 [ NCBI-GEO ]   LINC00514 [ EBI - ARRAY_EXPRESS ]   LINC00514 [ SEEK ]   LINC00514 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00514 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)283875
GTEX Portal (Tissue expression)LINC00514
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00514
DMDM Disease mutations283875
Blocks (Seattle)LINC00514
IPIIPI00644071   
Protein Interaction databases
BioGRIDLINC00514
STRING (EMBL)LINC00514
ZODIACLINC00514
Ontologies - Pathways
Huge Navigator LINC00514 [HugePedia]
snp3D : Map Gene to Disease283875
BioCentury BCIQLINC00514
ClinGenLINC00514
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283875
Clinical trialLINC00514
Miscellaneous
canSAR (ICR)LINC00514 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00514
EVEXLINC00514
GoPubMedLINC00514
iHOPLINC00514
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:20:22 CEST 2017

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