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LINC00520 (long intergenic non-protein coding RNA 520)

Identity

Alias_namesC14orf34
chromosome 14 open reading frame 34
Other alias
HGNC (Hugo) LINC00520
LocusID (NCBI) 645687
Atlas_Id 65469
Location 14q22.3  [Link to chromosome band 14q22]
Location_base_pair Starts at 56247853 and ends at 56263392 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00520   19843
Cards
Entrez_Gene (NCBI)LINC00520  645687  long intergenic non-protein coding RNA 520
AliasesC14orf34
GeneCards (Weizmann)LINC00520
Ensembl hg19 (Hinxton) [Gene_View]  chr14:56247853-56263392 [Contig_View]  LINC00520 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:56247853-56263392 [Contig_View]  LINC00520 [Vega]
TCGA cBioPortalLINC00520
AceView (NCBI)LINC00520
Genatlas (Paris)LINC00520
WikiGenes645687
SOURCE (Princeton)LINC00520
Genetics Home Reference (NIH)LINC00520
Genomic and cartography
GoldenPath hg19 (UCSC)LINC00520  -     chr14:56247853-56263392 -  14q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LINC00520  -     14q22.3   [Description]    (hg38-Dec_2013)
EnsemblLINC00520 - 14q22.3 [CytoView hg19]  LINC00520 - 14q22.3 [CytoView hg38]
Mapping of homologs : NCBILINC00520 [Mapview hg19]  LINC00520 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG104219 BU171486 BU178088 LN608514 LN608515
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)LINC00520
Cluster EST : UnigeneHs.569345 [ NCBI ]
CGAP (NCI)Hs.569345
Gene ExpressionLINC00520 [ NCBI-GEO ]   LINC00520 [ EBI - ARRAY_EXPRESS ]   LINC00520 [ SEEK ]   LINC00520 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00520 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)645687
GTEX Portal (Tissue expression)LINC00520
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00520
DMDM Disease mutations645687
Blocks (Seattle)LINC00520
Protein Interaction databases
BioGRIDLINC00520
STRING (EMBL)LINC00520
ZODIACLINC00520
Ontologies - Pathways
Huge Navigator LINC00520 [HugePedia]
snp3D : Map Gene to Disease645687
BioCentury BCIQLINC00520
ClinGenLINC00520
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD645687
Chemical/Pharm GKB GenePA134879587
Clinical trialLINC00520
Miscellaneous
canSAR (ICR)LINC00520 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00520
EVEXLINC00520
GoPubMedLINC00520
iHOPLINC00520
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:11:52 CET 2017

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