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LINC00525 (long intergenic non-protein coding RNA 525)

Identity

Other alias-
HGNC (Hugo) LINC00525
LocusID (NCBI) 84847
Atlas_Id 65472
Location 7p12.3  [Link to chromosome band 7p12]
Location_base_pair Starts at 47761476 and ends at 47766772 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00525   40290
Cards
Entrez_Gene (NCBI)LINC00525  84847  long intergenic non-protein coding RNA 525
Aliases
GeneCards (Weizmann)LINC00525
Ensembl hg19 (Hinxton)ENSG00000146666 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000146666 [Gene_View]  chr7:47761476-47766772 [Contig_View]  LINC00525 [Vega]
ICGC DataPortalENSG00000146666
TCGA cBioPortalLINC00525
AceView (NCBI)LINC00525
Genatlas (Paris)LINC00525
WikiGenes84847
SOURCE (Princeton)LINC00525
Genetics Home Reference (NIH)LINC00525
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00525  -     chr7:47761476-47766772 +  7p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00525  -     7p12.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00525 - 7p12.3 [CytoView hg19]  LINC00525 - 7p12.3 [CytoView hg38]
Mapping of homologs : NCBILINC00525 [Mapview hg19]  LINC00525 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC007354
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00525
Cluster EST : UnigeneHs.488236 [ NCBI ]
CGAP (NCI)Hs.488236
Alternative Splicing GalleryENSG00000146666
Gene ExpressionLINC00525 [ NCBI-GEO ]   LINC00525 [ EBI - ARRAY_EXPRESS ]   LINC00525 [ SEEK ]   LINC00525 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00525 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)84847
GTEX Portal (Tissue expression)LINC00525
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00525
DMDM Disease mutations84847
Blocks (Seattle)LINC00525
Human Protein AtlasENSG00000146666
IPIIPI00063704   IPI00981802   
Protein Interaction databases
FunCoupENSG00000146666
BioGRIDLINC00525
STRING (EMBL)LINC00525
ZODIACLINC00525
Ontologies - Pathways
Huge Navigator LINC00525 [HugePedia]
snp3D : Map Gene to Disease84847
BioCentury BCIQLINC00525
ClinGenLINC00525
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84847
Clinical trialLINC00525
Miscellaneous
canSAR (ICR)LINC00525 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00525
EVEXLINC00525
GoPubMedLINC00525
iHOPLINC00525
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:56:45 CEST 2017

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