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LINC00529 (long intergenic non-protein coding RNA 529)

Identity

Alias_namesC8orf8
chromosome 8 open reading frame 8
Other alias
HGNC (Hugo) LINC00529
LocusID (NCBI) 83647
Atlas_Id 65476
Location 8p23.1  [Link to chromosome band 8p23]
Location_base_pair Starts at 11247626 and ends at 11267865 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC00529   15544
Cards
Entrez_Gene (NCBI)LINC00529  83647  long intergenic non-protein coding RNA 529
AliasesC8orf8
GeneCards (Weizmann)LINC00529
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:11247626-11267865 [Contig_View]  LINC00529 [Vega]
TCGA cBioPortalLINC00529
AceView (NCBI)LINC00529
Genatlas (Paris)LINC00529
WikiGenes83647
SOURCE (Princeton)LINC00529
Genetics Home Reference (NIH)LINC00529
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00529  -     chr8:11247626-11267865 -  8p23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00529  -     8p23.1   [Description]    (hg19-Feb_2009)
EnsemblLINC00529 - 8p23.1 [CytoView hg19]  LINC00529 - 8p23.1 [CytoView hg38]
Mapping of homologs : NCBILINC00529 [Mapview hg19]  LINC00529 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ301561
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00529
Cluster EST : UnigeneHs.404138 [ NCBI ]
CGAP (NCI)Hs.404138
Gene ExpressionLINC00529 [ NCBI-GEO ]   LINC00529 [ EBI - ARRAY_EXPRESS ]   LINC00529 [ SEEK ]   LINC00529 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00529 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)83647
GTEX Portal (Tissue expression)LINC00529
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00529
DMDM Disease mutations83647
Blocks (Seattle)LINC00529
IPIIPI00102094   
Protein Interaction databases
BioGRIDLINC00529
STRING (EMBL)LINC00529
ZODIACLINC00529
Ontologies - Pathways
Huge Navigator LINC00529 [HugePedia]
snp3D : Map Gene to Disease83647
BioCentury BCIQLINC00529
ClinGenLINC00529
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD83647
Chemical/Pharm GKB GenePA25966
Clinical trialLINC00529
Miscellaneous
canSAR (ICR)LINC00529 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00529
EVEXLINC00529
GoPubMedLINC00529
iHOPLINC00529
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:54:26 CET 2017

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