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LINC00556 (long intergenic non-protein coding RNA 556)

Identity

Other alias-
HGNC (Hugo) LINC00556
LocusID (NCBI) 100861551
Atlas_Id 65492
Location 13q12.11  [Link to chromosome band 13q12]
Location_base_pair Starts at 20181531 and ends at 20181942 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)LINC00556   43700
Cards
Entrez_Gene (NCBI)LINC00556  100861551  long intergenic non-protein coding RNA 556
Aliases
GeneCards (Weizmann)LINC00556
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:20181531-20181942 [Contig_View]  LINC00556 [Vega]
TCGA cBioPortalLINC00556
AceView (NCBI)LINC00556
Genatlas (Paris)LINC00556
WikiGenes100861551
SOURCE (Princeton)LINC00556
Genetics Home Reference (NIH)LINC00556
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00556  -     chr13:20181531-20181942 +  13q12.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00556  -     13q12.11   [Description]    (hg19-Feb_2009)
EnsemblLINC00556 - 13q12.11 [CytoView hg19]  LINC00556 - 13q12.11 [CytoView hg38]
Mapping of homologs : NCBILINC00556 [Mapview hg19]  LINC00556 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF086361
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00556
Cluster EST : UnigeneHs.572247 [ NCBI ]
CGAP (NCI)Hs.572247
Gene ExpressionLINC00556 [ NCBI-GEO ]   LINC00556 [ EBI - ARRAY_EXPRESS ]   LINC00556 [ SEEK ]   LINC00556 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00556 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100861551
GTEX Portal (Tissue expression)LINC00556
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00556
DMDM Disease mutations100861551
Blocks (Seattle)LINC00556
Protein Interaction databases
BioGRIDLINC00556
STRING (EMBL)LINC00556
ZODIACLINC00556
Ontologies - Pathways
Huge Navigator LINC00556 [HugePedia]
snp3D : Map Gene to Disease100861551
BioCentury BCIQLINC00556
ClinGenLINC00556
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100861551
Clinical trialLINC00556
Miscellaneous
canSAR (ICR)LINC00556 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00556
EVEXLINC00556
GoPubMedLINC00556
iHOPLINC00556
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:19 CEST 2017

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