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LINC00559 (long intergenic non-protein coding RNA 559)

Identity

Other alias-
HGNC (Hugo) LINC00559
LocusID (NCBI) 100874187
Atlas_Id 65495
Location 13q31.3  [Link to chromosome band 13q31]
Location_base_pair Starts at 90060250 and ends at 90119717 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00559   43703
Cards
Entrez_Gene (NCBI)LINC00559  100874187  long intergenic non-protein coding RNA 559
Aliases
GeneCards (Weizmann)LINC00559
Ensembl hg19 (Hinxton)ENSG00000261446 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261446 [Gene_View]  chr13:90060250-90119717 [Contig_View]  LINC00559 [Vega]
ICGC DataPortalENSG00000261446
TCGA cBioPortalLINC00559
AceView (NCBI)LINC00559
Genatlas (Paris)LINC00559
WikiGenes100874187
SOURCE (Princeton)LINC00559
Genetics Home Reference (NIH)LINC00559
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00559  -     chr13:90060250-90119717 -  13q31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00559  -     13q31.3   [Description]    (hg19-Feb_2009)
EnsemblLINC00559 - 13q31.3 [CytoView hg19]  LINC00559 - 13q31.3 [CytoView hg38]
Mapping of homologs : NCBILINC00559 [Mapview hg19]  LINC00559 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043442
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00559
Cluster EST : UnigeneHs.743194 [ NCBI ]
CGAP (NCI)Hs.743194
Alternative Splicing GalleryENSG00000261446
Gene ExpressionLINC00559 [ NCBI-GEO ]   LINC00559 [ EBI - ARRAY_EXPRESS ]   LINC00559 [ SEEK ]   LINC00559 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00559 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874187
GTEX Portal (Tissue expression)LINC00559
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00559
DMDM Disease mutations100874187
Blocks (Seattle)LINC00559
Human Protein AtlasENSG00000261446
Protein Interaction databases
FunCoupENSG00000261446
BioGRIDLINC00559
STRING (EMBL)LINC00559
ZODIACLINC00559
Ontologies - Pathways
Huge Navigator LINC00559 [HugePedia]
snp3D : Map Gene to Disease100874187
BioCentury BCIQLINC00559
ClinGenLINC00559
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874187
Clinical trialLINC00559
Miscellaneous
canSAR (ICR)LINC00559 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00559
EVEXLINC00559
GoPubMedLINC00559
iHOPLINC00559
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:56:51 CEST 2017

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