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LINC00560 (long intergenic non-protein coding RNA 560)

Identity

Other alias-
HGNC (Hugo) LINC00560
LocusID (NCBI) 100861553
Atlas_Id 65496
Location 13q31.2  [Link to chromosome band 13q31]
Location_base_pair Starts at 88626853 and ends at 88630397 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00560   43704
Cards
Entrez_Gene (NCBI)LINC00560  100861553  long intergenic non-protein coding RNA 560
Aliases
GeneCards (Weizmann)LINC00560
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:88626853-88630397 [Contig_View]  LINC00560 [Vega]
TCGA cBioPortalLINC00560
AceView (NCBI)LINC00560
Genatlas (Paris)LINC00560
WikiGenes100861553
SOURCE (Princeton)LINC00560
Genetics Home Reference (NIH)LINC00560
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00560  -     chr13:88626853-88630397 +  13q31.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00560  -     13q31.2   [Description]    (hg19-Feb_2009)
EnsemblLINC00560 - 13q31.2 [CytoView hg19]  LINC00560 - 13q31.2 [CytoView hg38]
Mapping of homologs : NCBILINC00560 [Mapview hg19]  LINC00560 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043278
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00560
Cluster EST : UnigeneHs.560132 [ NCBI ]
CGAP (NCI)Hs.560132
Gene ExpressionLINC00560 [ NCBI-GEO ]   LINC00560 [ EBI - ARRAY_EXPRESS ]   LINC00560 [ SEEK ]   LINC00560 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00560 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100861553
GTEX Portal (Tissue expression)LINC00560
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00560
DMDM Disease mutations100861553
Blocks (Seattle)LINC00560
Protein Interaction databases
BioGRIDLINC00560
STRING (EMBL)LINC00560
ZODIACLINC00560
Ontologies - Pathways
Huge Navigator LINC00560 [HugePedia]
snp3D : Map Gene to Disease100861553
BioCentury BCIQLINC00560
ClinGenLINC00560
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100861553
Clinical trialLINC00560
Miscellaneous
canSAR (ICR)LINC00560 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00560
EVEXLINC00560
GoPubMedLINC00560
iHOPLINC00560
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:56:51 CEST 2017

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