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LINC00565 (long intergenic non-protein coding RNA 565)

Identity

Other alias-
HGNC (Hugo) LINC00565
LocusID (NCBI) 100861555
Atlas_Id 65501
Location 13q34  [Link to chromosome band 13q34]
Location_base_pair Starts at 113926514 and ends at 113928991 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00565   43709
Cards
Entrez_Gene (NCBI)LINC00565  100861555  long intergenic non-protein coding RNA 565
Aliases
GeneCards (Weizmann)LINC00565
Ensembl hg19 (Hinxton)ENSG00000260910 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260910 [Gene_View]  chr13:113926514-113928991 [Contig_View]  LINC00565 [Vega]
ICGC DataPortalENSG00000260910
TCGA cBioPortalLINC00565
AceView (NCBI)LINC00565
Genatlas (Paris)LINC00565
WikiGenes100861555
SOURCE (Princeton)LINC00565
Genetics Home Reference (NIH)LINC00565
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00565  -     chr13:113926514-113928991 -  13q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00565  -     13q34   [Description]    (hg19-Feb_2009)
EnsemblLINC00565 - 13q34 [CytoView hg19]  LINC00565 - 13q34 [CytoView hg38]
Mapping of homologs : NCBILINC00565 [Mapview hg19]  LINC00565 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092053 BQ576193
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00565
Cluster EST : UnigeneHs.353773 [ NCBI ]
CGAP (NCI)Hs.353773
Alternative Splicing GalleryENSG00000260910
Gene ExpressionLINC00565 [ NCBI-GEO ]   LINC00565 [ EBI - ARRAY_EXPRESS ]   LINC00565 [ SEEK ]   LINC00565 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00565 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100861555
GTEX Portal (Tissue expression)LINC00565
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00565
DMDM Disease mutations100861555
Blocks (Seattle)LINC00565
Human Protein AtlasENSG00000260910
Protein Interaction databases
FunCoupENSG00000260910
BioGRIDLINC00565
STRING (EMBL)LINC00565
ZODIACLINC00565
Ontologies - Pathways
Huge Navigator LINC00565 [HugePedia]
snp3D : Map Gene to Disease100861555
BioCentury BCIQLINC00565
ClinGenLINC00565
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100861555
Clinical trialLINC00565
Miscellaneous
canSAR (ICR)LINC00565 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00565
EVEXLINC00565
GoPubMedLINC00565
iHOPLINC00565
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:13:20 CEST 2017

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