Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC00566 (long intergenic non-protein coding RNA 566)

Identity

Other alias-
HGNC (Hugo) LINC00566
LocusID (NCBI) 100861547
Atlas_Id 65502
Location 13q12.12  [Link to chromosome band 13q12]
Location_base_pair Starts at 24331450 and ends at 24337120 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00566   43710
Cards
Entrez_Gene (NCBI)LINC00566  100861547  long intergenic non-protein coding RNA 566
Aliases
GeneCards (Weizmann)LINC00566
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:24331450-24337120 [Contig_View]  LINC00566 [Vega]
TCGA cBioPortalLINC00566
AceView (NCBI)LINC00566
Genatlas (Paris)LINC00566
WikiGenes100861547
SOURCE (Princeton)LINC00566
Genetics Home Reference (NIH)LINC00566
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00566  -     chr13:24331450-24337120 +  13q12.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00566  -     13q12.12   [Description]    (hg19-Feb_2009)
EnsemblLINC00566 - 13q12.12 [CytoView hg19]  LINC00566 - 13q12.12 [CytoView hg38]
Mapping of homologs : NCBILINC00566 [Mapview hg19]  LINC00566 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC038727
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00566
Cluster EST : UnigeneHs.585625 [ NCBI ]
CGAP (NCI)Hs.585625
Gene ExpressionLINC00566 [ NCBI-GEO ]   LINC00566 [ EBI - ARRAY_EXPRESS ]   LINC00566 [ SEEK ]   LINC00566 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00566 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100861547
GTEX Portal (Tissue expression)LINC00566
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00566
DMDM Disease mutations100861547
Blocks (Seattle)LINC00566
Protein Interaction databases
BioGRIDLINC00566
STRING (EMBL)LINC00566
ZODIACLINC00566
Ontologies - Pathways
Huge Navigator LINC00566 [HugePedia]
snp3D : Map Gene to Disease100861547
BioCentury BCIQLINC00566
ClinGenLINC00566
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100861547
Clinical trialLINC00566
Miscellaneous
canSAR (ICR)LINC00566 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00566
EVEXLINC00566
GoPubMedLINC00566
iHOPLINC00566
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:20 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.