Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LINC00567 (long intergenic non-protein coding RNA 567)

Identity

Other alias-
HGNC (Hugo) LINC00567
LocusID (NCBI) 283486
Atlas_Id 65503
Location 13q34  [Link to chromosome band 13q34]
Location_base_pair Starts at 110809676 and ends at 110813084 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00567   43711
Cards
Entrez_Gene (NCBI)LINC00567  283486  long intergenic non-protein coding RNA 567
Aliases
GeneCards (Weizmann)LINC00567
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:110809676-110813084 [Contig_View]  LINC00567 [Vega]
TCGA cBioPortalLINC00567
AceView (NCBI)LINC00567
Genatlas (Paris)LINC00567
WikiGenes283486
SOURCE (Princeton)LINC00567
Genetics Home Reference (NIH)LINC00567
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00567  -     chr13:110809676-110813084 -  13q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00567  -     13q34   [Description]    (hg19-Feb_2009)
EnsemblLINC00567 - 13q34 [CytoView hg19]  LINC00567 - 13q34 [CytoView hg38]
Mapping of homologs : NCBILINC00567 [Mapview hg19]  LINC00567 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC035264
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00567
Cluster EST : UnigeneHs.447504 [ NCBI ]
CGAP (NCI)Hs.447504
Gene ExpressionLINC00567 [ NCBI-GEO ]   LINC00567 [ EBI - ARRAY_EXPRESS ]   LINC00567 [ SEEK ]   LINC00567 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00567 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)283486
GTEX Portal (Tissue expression)LINC00567
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00567
DMDM Disease mutations283486
Blocks (Seattle)LINC00567
IPIIPI00980795   
Protein Interaction databases
BioGRIDLINC00567
STRING (EMBL)LINC00567
ZODIACLINC00567
Ontologies - Pathways
Huge Navigator LINC00567 [HugePedia]
snp3D : Map Gene to Disease283486
BioCentury BCIQLINC00567
ClinGenLINC00567
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283486
Clinical trialLINC00567
Miscellaneous
canSAR (ICR)LINC00567 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00567
EVEXLINC00567
GoPubMedLINC00567
iHOPLINC00567
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:28:25 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.