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LINC00582 (long intergenic non-protein coding RNA 582)

Identity

Other alias-
HGNC (Hugo) LINC00582
LocusID (NCBI) 100287814
Atlas_Id 65512
Location 1q42.2  [Link to chromosome band 1q42]
Location_base_pair Starts at 231591292 and ends at 231612090 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00582   43842
Cards
Entrez_Gene (NCBI)LINC00582  100287814  long intergenic non-protein coding RNA 582
Aliases
GeneCards (Weizmann)LINC00582
Ensembl hg19 (Hinxton)ENSG00000229228 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229228 [Gene_View]  chr1:231591292-231612090 [Contig_View]  LINC00582 [Vega]
ICGC DataPortalENSG00000229228
TCGA cBioPortalLINC00582
AceView (NCBI)LINC00582
Genatlas (Paris)LINC00582
WikiGenes100287814
SOURCE (Princeton)LINC00582
Genetics Home Reference (NIH)LINC00582
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00582  -     chr1:231591292-231612090 -  1q42.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00582  -     1q42.2   [Description]    (hg19-Feb_2009)
EnsemblLINC00582 - 1q42.2 [CytoView hg19]  LINC00582 - 1q42.2 [CytoView hg38]
Mapping of homologs : NCBILINC00582 [Mapview hg19]  LINC00582 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI820788 AW207115 BX092370
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00582
Cluster EST : UnigeneHs.25555 [ NCBI ]
CGAP (NCI)Hs.25555
Alternative Splicing GalleryENSG00000229228
Gene ExpressionLINC00582 [ NCBI-GEO ]   LINC00582 [ EBI - ARRAY_EXPRESS ]   LINC00582 [ SEEK ]   LINC00582 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00582 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287814
GTEX Portal (Tissue expression)LINC00582
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00582
DMDM Disease mutations100287814
Blocks (Seattle)LINC00582
Human Protein AtlasENSG00000229228
Protein Interaction databases
FunCoupENSG00000229228
BioGRIDLINC00582
STRING (EMBL)LINC00582
ZODIACLINC00582
Ontologies - Pathways
Huge Navigator LINC00582 [HugePedia]
snp3D : Map Gene to Disease100287814
BioCentury BCIQLINC00582
ClinGenLINC00582
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287814
Clinical trialLINC00582
Miscellaneous
canSAR (ICR)LINC00582 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00582
EVEXLINC00582
GoPubMedLINC00582
iHOPLINC00582
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:13:22 CEST 2017

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