Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LINC00589 (long intergenic non-protein coding RNA 589)


Alias (NCBI)C8orf75
HGNC (Hugo) LINC00589
HGNC Alias symbTSLNC8
HGNC Alias nametumor suppressor lncRNA on chromosome 8p12
HGNC Previous nameC8orf75
HGNC Previous namechromosome 8 open reading frame 75
LocusID (NCBI) 619351
Atlas_Id 57904
Location 8p12  [Link to chromosome band 8p12]
Location_base_pair Starts at 29721260 and ends at 29748109 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)LINC00589   32299
Entrez_Gene (NCBI)LINC00589    long intergenic non-protein coding RNA 589
AliasesC8orf75; TSLNC8
GeneCards (Weizmann)LINC00589
Ensembl hg19 (Hinxton)ENSG00000251191 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251191 [Gene_View]  ENSG00000251191 [Sequence]  chr8:29721260-29748109 [Contig_View]  LINC00589 [Vega]
ICGC DataPortalENSG00000251191
TCGA cBioPortalLINC00589
AceView (NCBI)LINC00589
Genatlas (Paris)LINC00589
SOURCE (Princeton)LINC00589
Genetics Home Reference (NIH)LINC00589
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00589  -     chr8:29721260-29748109 -  8p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00589  -     8p12   [Description]    (hg19-Feb_2009)
GoldenPathLINC00589 - 8p12 [CytoView hg19]  LINC00589 - 8p12 [CytoView hg38]
Genome Data Viewer NCBILINC00589 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC003524 BC014230
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00589
Gene ExpressionLINC00589 [ NCBI-GEO ]   LINC00589 [ EBI - ARRAY_EXPRESS ]   LINC00589 [ SEEK ]   LINC00589 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00589 [ Firebrowse - Broad ]
GenevisibleExpression of LINC00589 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)619351
GTEX Portal (Tissue expression)LINC00589
Human Protein AtlasENSG00000251191-LINC00589 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00589
Human Protein Atlas [tissue]ENSG00000251191-LINC00589 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:16:06 CEST 2021

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