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LINC00589 (long intergenic non-protein coding RNA 589)

Identity

Alias_namesC8orf75
chromosome 8 open reading frame 75
Other alias
HGNC (Hugo) LINC00589
LocusID (NCBI) 619351
Atlas_Id 65516
Location 8p12  [Link to chromosome band 8p12]
Location_base_pair Starts at 29721260 and ends at 29748109 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00589   32299
Cards
Entrez_Gene (NCBI)LINC00589  619351  long intergenic non-protein coding RNA 589
AliasesC8orf75
GeneCards (Weizmann)LINC00589
Ensembl hg19 (Hinxton)ENSG00000251191 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251191 [Gene_View]  chr8:29721260-29748109 [Contig_View]  LINC00589 [Vega]
ICGC DataPortalENSG00000251191
TCGA cBioPortalLINC00589
AceView (NCBI)LINC00589
Genatlas (Paris)LINC00589
WikiGenes619351
SOURCE (Princeton)LINC00589
Genetics Home Reference (NIH)LINC00589
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00589  -     chr8:29721260-29748109 -  8p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00589  -     8p12   [Description]    (hg19-Feb_2009)
EnsemblLINC00589 - 8p12 [CytoView hg19]  LINC00589 - 8p12 [CytoView hg38]
Mapping of homologs : NCBILINC00589 [Mapview hg19]  LINC00589 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC003524 BC014230
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00589
Cluster EST : UnigeneHs.566911 [ NCBI ]
CGAP (NCI)Hs.566911
Alternative Splicing GalleryENSG00000251191
Gene ExpressionLINC00589 [ NCBI-GEO ]   LINC00589 [ EBI - ARRAY_EXPRESS ]   LINC00589 [ SEEK ]   LINC00589 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00589 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)619351
GTEX Portal (Tissue expression)LINC00589
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00589
DMDM Disease mutations619351
Blocks (Seattle)LINC00589
Human Protein AtlasENSG00000251191
IPIIPI00747872   IPI00798226   
Protein Interaction databases
FunCoupENSG00000251191
BioGRIDLINC00589
STRING (EMBL)LINC00589
ZODIACLINC00589
Ontologies - Pathways
Huge Navigator LINC00589 [HugePedia]
snp3D : Map Gene to Disease619351
BioCentury BCIQLINC00589
ClinGenLINC00589
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD619351
Chemical/Pharm GKB GenePA142672338
Clinical trialLINC00589
Miscellaneous
canSAR (ICR)LINC00589 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00589
EVEXLINC00589
GoPubMedLINC00589
iHOPLINC00589
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:20:35 CEST 2017

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