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LINC00593 (long intergenic non-protein coding RNA 593)

Identity

Alias_namesC15orf50
chromosome 15 open reading frame 50
Alias_symbol (synonym)MGC42951
Other alias
HGNC (Hugo) LINC00593
LocusID (NCBI) 414926
Atlas_Id 65518
Location 15q23  [Link to chromosome band 15q23]
Location_base_pair Starts at 69835234 and ends at 69842967 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)LINC00593   32382
Cards
Entrez_Gene (NCBI)LINC00593  414926  long intergenic non-protein coding RNA 593
AliasesC15orf50
GeneCards (Weizmann)LINC00593
Ensembl hg19 (Hinxton)ENSG00000259703 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259703 [Gene_View]  chr15:69835234-69842967 [Contig_View]  LINC00593 [Vega]
ICGC DataPortalENSG00000259703
TCGA cBioPortalLINC00593
AceView (NCBI)LINC00593
Genatlas (Paris)LINC00593
WikiGenes414926
SOURCE (Princeton)LINC00593
Genetics Home Reference (NIH)LINC00593
Genomic and cartography
GoldenPath hg38 (UCSC)LINC00593  -     chr15:69835234-69842967 +  15q23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LINC00593  -     15q23   [Description]    (hg19-Feb_2009)
EnsemblLINC00593 - 15q23 [CytoView hg19]  LINC00593 - 15q23 [CytoView hg38]
Mapping of homologs : NCBILINC00593 [Mapview hg19]  LINC00593 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC031958
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LINC00593
Cluster EST : UnigeneHs.569502 [ NCBI ]
CGAP (NCI)Hs.569502
Alternative Splicing GalleryENSG00000259703
Gene ExpressionLINC00593 [ NCBI-GEO ]   LINC00593 [ EBI - ARRAY_EXPRESS ]   LINC00593 [ SEEK ]   LINC00593 [ MEM ]
Gene Expression Viewer (FireBrowse)LINC00593 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)414926
GTEX Portal (Tissue expression)LINC00593
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LINC00593
DMDM Disease mutations414926
Blocks (Seattle)LINC00593
Human Protein AtlasENSG00000259703
Protein Interaction databases
FunCoupENSG00000259703
BioGRIDLINC00593
STRING (EMBL)LINC00593
ZODIACLINC00593
Ontologies - Pathways
Huge Navigator LINC00593 [HugePedia]
snp3D : Map Gene to Disease414926
BioCentury BCIQLINC00593
ClinGenLINC00593
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD414926
Chemical/Pharm GKB GenePA142672267
Clinical trialLINC00593
Miscellaneous
canSAR (ICR)LINC00593 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLINC00593
EVEXLINC00593
GoPubMedLINC00593
iHOPLINC00593
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:56:57 CEST 2017

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